Gene Rcas_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0588 
Symbol 
ID5538051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp782032 
End bp782991 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content57% 
IMG OID640892749 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_001430735 
Protein GI156740606 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA
[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.175196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGG AAGTGCGTGT CGGTATCGAA CGCGCGGCCG CCGTAGGCGG CAGTGCGATC 
AACCTGCGTG GCAAACGGCG ATTCGGAGAG CATATCATCG AAACCATTGT CTTTATCTGC
GGCGCGCTTT CGATTTTTAC CACCACTGCA ATTGTTATTG TGCTGTTTCA GGAAGCATGG
ATGTTCTTTG GCTCACCCGA AGTGAACTTG ACTGAGTTCT TTGGCACCAC AACATGGCAA
CCGGAAACCG GACGCTTCGG CATCTGGCCA CTGATGACAT CAACGCTGCT GACGAGTTTT
ATCGCATTGC TTGTCGCGGT GCCGTTGGGG TTGGGAGCGG CGATCTATCT GAGCGAATAC
GCTTCGCCGA CCGCGCGTGG ATACCTCAAA CCGATCCTCG AAGTGCTGGC AGGCGTGCCG
ACCGTGGTCT ACGGCTATTT TGCGCTGACC TTCGTAACGC CGGTTATTCT TCAAGGGTTG
CTTGGCAAAG AACGTGTCGA GATTTACAAT ATGCTCTCCG CCGGCTTAAC GATGGGGATC
ATGATTCTGC CATTGGTCGC CTCGATGAGC GAGGACGCAT TGAGCGCCGT GCCTCGTTCA
CTCCGCGAGG GATCGTATGG GCTTGGCGCC ACGCGGCTCG AAACATCGGT GCGTGTGGTG
GTTCCGGCGG CATTGTCCGG CATTCTGGCG GCGGTCATCG TGGCTATGTC GCGCGCTGTC
GGCGAGACGA TGATCGTCGC ATTGGCAGCC GGCGCCGGTC CGCGCTTCAC CTTCAATCCG
TTACAAGCGG CTGAAACAAT GACCGGCCAT ATTGCCCGCA TCAGCGGCGG CGACATCAGT
TATGCCAGCA TTCAGTACAC CAGCATCTTC GCCATTGCGC TGGTGCTCTT CTTTATGACG
CTGCTGCTCA ACCTGTTGAG CGGTTGGGTT GTGCGGCGTT TCCGGGAGGT CTACGAATGA
 
Protein sequence
MEQEVRVGIE RAAAVGGSAI NLRGKRRFGE HIIETIVFIC GALSIFTTTA IVIVLFQEAW 
MFFGSPEVNL TEFFGTTTWQ PETGRFGIWP LMTSTLLTSF IALLVAVPLG LGAAIYLSEY
ASPTARGYLK PILEVLAGVP TVVYGYFALT FVTPVILQGL LGKERVEIYN MLSAGLTMGI
MILPLVASMS EDALSAVPRS LREGSYGLGA TRLETSVRVV VPAALSGILA AVIVAMSRAV
GETMIVALAA GAGPRFTFNP LQAAETMTGH IARISGGDIS YASIQYTSIF AIALVLFFMT
LLLNLLSGWV VRRFREVYE