Gene Rcas_0586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0586 
Symbol 
ID5538049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp779958 
End bp780776 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content58% 
IMG OID640892747 
Productphosphate ABC transporter, ATPase subunit 
Protein accessionYP_001430733 
Protein GI156740604 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.518906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCG CAGAACGTTC GTCTATCAAC ACGGCGCAGT CGAATGGCAA ATATGCCGTT 
GAACTGCACG ATACGCATAT CTATTATGGC TCGTTCCGCG CGGTAAAGAA CGTCACCTTG
CAGATTGAGC GCCAACGAAT TACGGCGTTT ATCGGACCGT CGGGGTGCGG CAAGAGCACG
GTGCTGCGCG CCATTAACCG GATGAATGAC CTGATCCCTG GTTCGCGCCT TGAGGGTCGC
ATCCTGTTCC ACGGCAAAAA TATTTACGAC CCCGATGTGG ACCCGGTTGA GGTGCGGCGG
CGGGTTGGCA TGGTGTTTCA GAAACCCAAT CCCTTCCCCA AGAGCATCTA CGACAACATC
ATGTTCGGTC CGCGTATCAA TGGCTGGCGC GGCACCAAAG CGCAGGCGGA CGAATTGGTG
GAGCGCGCGT TGCGCGGCGC CGCGATCTGG GATGAAGTCA AAGACAAGCT GCAGCAGCCC
GGCACGGCGC TCTCCGGCGG GCAGCAGCAG CGCTTGTGCA TCGCGCGCGC GCTGGCAGTG
CAGCCCGAAG TCATCCTGAT GGACGAACCC TGCTCGGCGC TCGATCCGAT TTCGACCCTG
AAGATCGAAG AGTTGATGCT CGAACTCCGG CGCAACTATA CGATTATTAT TGTGACCCAC
AACATGCAGC AGGCAAGTCG GGTGTCGGAC TACACCGCCT TCTTCCTGAT GGACGCGGAT
CGCGCCGGGC AACTCGTCGA GTACGGTTCA ACCGAACAGA TTTTCACCTC ACCCAACGAT
AAACGCACCG AAGATTATAT CAGCGGGCGC TTCGGGTAA
 
Protein sequence
MAVAERSSIN TAQSNGKYAV ELHDTHIYYG SFRAVKNVTL QIERQRITAF IGPSGCGKST 
VLRAINRMND LIPGSRLEGR ILFHGKNIYD PDVDPVEVRR RVGMVFQKPN PFPKSIYDNI
MFGPRINGWR GTKAQADELV ERALRGAAIW DEVKDKLQQP GTALSGGQQQ RLCIARALAV
QPEVILMDEP CSALDPISTL KIEELMLELR RNYTIIIVTH NMQQASRVSD YTAFFLMDAD
RAGQLVEYGS TEQIFTSPND KRTEDYISGR FG