Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0584 |
Symbol | |
ID | 5538047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 778258 |
End bp | 778824 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640892745 |
Product | hypothetical protein |
Protein accession | YP_001430731 |
Protein GI | 156740602 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.349057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTGCG TGCTGAGCCT TCAGTTGATG GGGCTGGCGG CGGTCGATCA ACCGCGCGGC TCGCAGTGGG CGGAGGCGCG CGCGCGTTGG AATGCGCAGG CGCCGGGTTC GTATCACATT GCTGTGCGGA TCGAGGCGCT AGGAAATGTG TGCGTCCAGC GTCTCGAGGT GCGTGGTGCG TGGGTGCGCC GCGTCATCGA GAACACTTGC GATGCGTTCT GGGTCGATCC GCTCACGGTT GATGAATTAT TTGCGCTTGC CAGCGACATT GAGAGTATCC CCGCCTCACG CTGTTCGCCA TCGCCGCACG ACTGCCCGTG CCACCGCGTC TTTACCCTGC GCCGCATTGA ATACGATGCA GCGTATGGCT TTCCAGTCAC TATTCTTGCG CGTTCTGAGG TGCAATTCCA TCCTGCGGCG CGCGATTTCT GGGAGTATCT CTGGCAGAAC CAACAGTTGC CAACGTGTCA ACCGGCGCGG CGTCGTTTCA CGGTGCAGGT GTTGTCGCTG ACGCCGCTCG CGCCTGAAGA CTCAACGCAG ACATCGGCGA TTGAAAAGGT GCAGTAA
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Protein sequence | MACVLSLQLM GLAAVDQPRG SQWAEARARW NAQAPGSYHI AVRIEALGNV CVQRLEVRGA WVRRVIENTC DAFWVDPLTV DELFALASDI ESIPASRCSP SPHDCPCHRV FTLRRIEYDA AYGFPVTILA RSEVQFHPAA RDFWEYLWQN QQLPTCQPAR RRFTVQVLSL TPLAPEDSTQ TSAIEKVQ
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