Gene Rcas_0584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0584 
Symbol 
ID5538047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp778258 
End bp778824 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content61% 
IMG OID640892745 
Producthypothetical protein 
Protein accessionYP_001430731 
Protein GI156740602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.349057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGCG TGCTGAGCCT TCAGTTGATG GGGCTGGCGG CGGTCGATCA ACCGCGCGGC 
TCGCAGTGGG CGGAGGCGCG CGCGCGTTGG AATGCGCAGG CGCCGGGTTC GTATCACATT
GCTGTGCGGA TCGAGGCGCT AGGAAATGTG TGCGTCCAGC GTCTCGAGGT GCGTGGTGCG
TGGGTGCGCC GCGTCATCGA GAACACTTGC GATGCGTTCT GGGTCGATCC GCTCACGGTT
GATGAATTAT TTGCGCTTGC CAGCGACATT GAGAGTATCC CCGCCTCACG CTGTTCGCCA
TCGCCGCACG ACTGCCCGTG CCACCGCGTC TTTACCCTGC GCCGCATTGA ATACGATGCA
GCGTATGGCT TTCCAGTCAC TATTCTTGCG CGTTCTGAGG TGCAATTCCA TCCTGCGGCG
CGCGATTTCT GGGAGTATCT CTGGCAGAAC CAACAGTTGC CAACGTGTCA ACCGGCGCGG
CGTCGTTTCA CGGTGCAGGT GTTGTCGCTG ACGCCGCTCG CGCCTGAAGA CTCAACGCAG
ACATCGGCGA TTGAAAAGGT GCAGTAA
 
Protein sequence
MACVLSLQLM GLAAVDQPRG SQWAEARARW NAQAPGSYHI AVRIEALGNV CVQRLEVRGA 
WVRRVIENTC DAFWVDPLTV DELFALASDI ESIPASRCSP SPHDCPCHRV FTLRRIEYDA
AYGFPVTILA RSEVQFHPAA RDFWEYLWQN QQLPTCQPAR RRFTVQVLSL TPLAPEDSTQ
TSAIEKVQ