Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0575 |
Symbol | |
ID | 5538038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 767419 |
End bp | 767814 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640892736 |
Product | HEPN domain-containing protein |
Protein accession | YP_001430722 |
Protein GI | 156740593 |
COG category | [S] Function unknown |
COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.973071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.183085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAA GTAATCCCCT GGATTGGGTC GCCAAGGCTG AAGGCGACCT CGACATGGCG CGGCGCGCCC TGCGCGGTAA AATGCGGCAT ACCGATGCTG CCGTTTTTCA CGCGCAACAA TGCGCCGAAA AATATCTCAA GGCGCTGCTC ATCGCCGGAA CAATCACATT TCCTAAGACA CACGATCTGA CGATCCTGCG CCACCTCTGT ATCAGCAATG GCATTCCGGT CAATGTGGAC GAGCCTGCGC TCGATTTCCT CTCTGGATAT GCGGTCAATG CGCGCTACCC TGGCGCTGAA CCATCGCTGG AGGAAGCCCG CGAAGCCATC GCCATCGCCC GAAGCGTTCG CGCATTCGCG CGCCGATGGT TGGGGATGAA AGGAGGGCGC CCATGA
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Protein sequence | MKESNPLDWV AKAEGDLDMA RRALRGKMRH TDAAVFHAQQ CAEKYLKALL IAGTITFPKT HDLTILRHLC ISNGIPVNVD EPALDFLSGY AVNARYPGAE PSLEEAREAI AIARSVRAFA RRWLGMKGGR P
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