| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0567 |
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| Symbol | |
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| ID | 5538030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 756980 |
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| End bp | 759502 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892728 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430714 |
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| Protein GI | 156740585 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3002] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.038441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.839812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGC ACATGGCTGA GACTCGAACC CGACCTGCGC CAATGATGGC TGCGTCGCTT
CAGATGGTTA CCGCCGATAT GATCGCGGCA GCAGCGAAGC GCGCCGAGCA GCGCATCGCT
CCGCTGTGGC CCCTGCGCAA TTTTGTGGCG GTCAATCCAT ATCTGGGTCT GCTCGATTAC
TCCTTCGAGA CCGCCGCCGA ACTGCTGGCG CGCCGGGCTG GCGCCCGGAC GACCGCCCCA
CGCGCGTTCT ATGCGCAGGC AATTCGCGAC GGGCGCATCA CCGATGCCGA TCTTGCGTCC
GCTCTGGCTG AGGGAAGCCC ATCCCCCGGC GCACCTGCGA CCGTCGAGGC GCTGAAGGCG
TTCGCCTTGA GCAATGCGCC AGAGCCGACC TTCACCACGC TGCCGACTGT CGCCGATGTT
GCGCGTGAGA TCACCGGCGT CAACTGGGCT GATATTGTGA CCGACTCGAT CTCGGCGTGG
GCCGGCGCCT ACTTCGATCT GGGTCAGTCC TACTGGCGGT CGCCCTGGAA ACCGATGTCG
GCGTATGCTG CATGGCGGGC TGAGGCAACG TATGACCGAA CACCACATAT ACGCGGCGCT
CAGGGCTTTC ATCAGGCGCT GCGTGAATTG CCGGAATCGG CGATGGAAAC GATTATTGCG
GCAGTGGAGA TGTTGCATAT TCCCGCCGAT GGGCTTGAAG CATATCTGCA CCGGCTCTTG
CTGACCATTC ACGGTTGGGC TGGTTATGCC CGCTACCTGC GCTGGGAAGC CGAACTCTAC
GGTGGCGCAG ATCACACGCT GACCGATCTG CTGGCGATCC GCCTGGTGTG GGAAGTGGCG
CTCTGGCGCA GTTTCGCGTC CAGAGGAATG GCGGAAGCGT GGCGCACACG CAGTCATGAA
TTGGTCGGCG ATCAACTGGA TGCAGCGCTC CAGCGCGCGA TCGCTGGCGA TCTGTTGCTC
CAGCGCGCCT TCGAGAAAGC GTATCAGCGC CAGTTGTTTG CCTGCCTCGG TACGCCAAAA
CCGGTCAAAC ACGCAACACG GAAGCGGGCG CAGGCCGCCT TCTGCATCGA TGTCCGCTCC
GAGATCTTTC GGCGCGCGCT CGAAACCGTG ACCGATGAGA TCGAGACAAT CGGATTTGCG
GGTTTCTTTG GCTTCCCGAT CGAGTATGTG CCGCTGGCGG AAACCCGCGG CGGAGCGCAG
TGTCCGGTCT TGCTTACGCC GCAGTTCGTC ATTGCCGAGT CGGTCGGCGG TGCGTCCGAA
ACTGAAGTGA CCGCCGTGAT CGAGAAGCGC GCCCTGAATC AGCGCGTCGC CAAAGTATGG
CGCATGTTCA AGTTCGGACC GGTCTCCTGC TTCGGGTTCG TCGGTCCGGT CGGGCTGGCA
TATGTGCGGA AGTTGCTGCT GGATACGCTG GGAATTACCC GCCCGGTGCC GCATCCGGCG
ACTTTCGGGC TGGATGCGCG CACCCGCGAG CGCGTCAAAC CGAGCCTCGA ACCGCGCGCG
ATCGGTGGGC GCACAACGGG CATGTCGCCG GAGCAGCGGG TGAATGTCGC CGAAGGCGCA
CTCAAAGCGA TGTCGTTGAC GAGCAACTTT GCTCGCCTCG TGCTGCTTGC CGGGCACGGC
TCGACGACCG TCAACAACCC GCATGCGACC GGTCTTGACT GCGGCGCATG CGGTGGTCAT
ACCGGCGAGG CGAATGTGCG GGTGGCAGTG CAGATACTTA ACGATCCGGC GGCGCGCACC
GGCTTGAAAG CGCGCGGCAT TGTCATTCCA GACGATACCG TGTTTGTGGC CGGTCTACAC
GACACCACGA CCGATGATGT GACCATTTTT GATAAGAATG ATATTCCGGC AAGCCATGCC
GATGATCTGA GGCGGCTCGA AGCCGATCTC GCCGCCGCCG GACGACTGGC GCGCGCCGAG
CGGGCTGCTT TGCTGAAGAT TGATCCGAAG GGGAACATCG ACGGCGCGGT GCGTCAGCGG
AGCAGAGACT GGTCGCAGGT GCGGCCAGAA TGGGGACTGG CCGGCTGTGC AGCATTTATT
GCCGCCCCGC GCGACCGCAC TGCTGGCGCG AAACTGGATG GTCGCTCGTT CCTGCACAAC
TACGACTGGC GGCAGGACGA AGGCTTCGGC GTGCTGGAAC TGATCATGAC GGCGCCGATG
ATTGTCGCAA GCTGGATCAA TTTGCAGTAC TACGGCTCGA CGGTGGACAA CCGGGTTTTT
GGCAGCGGCA ACAAGACGCT GCACAATGTC GTCGGCACCC TTGGCGTACT CGAAGGCAAT
TCCGGCGACC TGCGGGTCGG GCTGCCGTGG CAGTCGGTCC ACGATGGCGA ACGCTATGTC
CACGAGCCGA TGCGCCTGCA CGTGATGATT GAAGCGCCGA TTGAGGCGAT GACCGCAATT
ATCGCCCGAC ATGAGCAGGT GCGGCAGTTG CTCGACAACG GCTGGCTCTA CCTGTTTGCG
CTCGACGAGC GTGGCAAAGT GACGCATACG TATGCTGGCG GTTTGCGATG GGAGGCGTGT
TGA
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| Protein sequence | MMMHMAETRT RPAPMMAASL QMVTADMIAA AAKRAEQRIA PLWPLRNFVA VNPYLGLLDY
SFETAAELLA RRAGARTTAP RAFYAQAIRD GRITDADLAS ALAEGSPSPG APATVEALKA
FALSNAPEPT FTTLPTVADV AREITGVNWA DIVTDSISAW AGAYFDLGQS YWRSPWKPMS
AYAAWRAEAT YDRTPHIRGA QGFHQALREL PESAMETIIA AVEMLHIPAD GLEAYLHRLL
LTIHGWAGYA RYLRWEAELY GGADHTLTDL LAIRLVWEVA LWRSFASRGM AEAWRTRSHE
LVGDQLDAAL QRAIAGDLLL QRAFEKAYQR QLFACLGTPK PVKHATRKRA QAAFCIDVRS
EIFRRALETV TDEIETIGFA GFFGFPIEYV PLAETRGGAQ CPVLLTPQFV IAESVGGASE
TEVTAVIEKR ALNQRVAKVW RMFKFGPVSC FGFVGPVGLA YVRKLLLDTL GITRPVPHPA
TFGLDARTRE RVKPSLEPRA IGGRTTGMSP EQRVNVAEGA LKAMSLTSNF ARLVLLAGHG
STTVNNPHAT GLDCGACGGH TGEANVRVAV QILNDPAART GLKARGIVIP DDTVFVAGLH
DTTTDDVTIF DKNDIPASHA DDLRRLEADL AAAGRLARAE RAALLKIDPK GNIDGAVRQR
SRDWSQVRPE WGLAGCAAFI AAPRDRTAGA KLDGRSFLHN YDWRQDEGFG VLELIMTAPM
IVASWINLQY YGSTVDNRVF GSGNKTLHNV VGTLGVLEGN SGDLRVGLPW QSVHDGERYV
HEPMRLHVMI EAPIEAMTAI IARHEQVRQL LDNGWLYLFA LDERGKVTHT YAGGLRWEAC
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