| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0566 |
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| Symbol | |
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| ID | 5538029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 755361 |
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| End bp | 756941 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892727 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001430713 |
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| Protein GI | 156740584 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.28147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGGTA TGATGGGTGG CAATCTGGCG CTTATCGGGT ATCTTGCGCC GCTGTCGCTG
GCAGTTGTGG CGCTCATCGC GTGGCTGTCG CGGTCGGTTA ATCTGACGTT TCAGCTTGGA
CGCATTGCCA GTATCGGTTC GTTCCTGCTG TTGCTTGGGC TTGGGATTGT CGTCTTCACC
TCCGGTCCGA TGGTCAGTCC GGTAATCGGC GTCGGCGAGG CGGGCATCGC CCTGCGCCTC
GATGCGCTGA GCGTGATGAT GTCGTGGTTG GTGACGCTGC TGGGGACGCT GCTGATCCAG
TTCAGCCGCA ACTATCTCGA TGGCGATCCG CACCAGAAAC TCTTTTTCAT CCGCCTCTAC
CTGACGGTCA GCGCGGTTCT GTTGATGGTG CTGTCCGGTA ATCTCTGGCA ACTGGTTCTG
GCGTGGATTG GCATGAGTCT TGCGTTGCAC GAGCTGCTGG TGTTTTATCC TGAGCGTCCG
CGCGCTCTTC GGGCTGCCCG CAAGAAATTC ATTACCGCCC GCATCGGCGA TGTGTGCCTG
ATCGTTGCTG CGGTGTTGCT CGCGCAAACA TTTGGTACGA CCGATCTGGG CATGATCCGT
GAGGCGGCTG CCAGTGCGCT TGCAGGTGGA ACCATCCCCG CCGGTGCTGC CATCGCAGCG
ATCCTGATCG TCATCGTCGC TGCGCTGAAA TCGGCGATGT TCCCTTTCCA TGGCTGGCTG
CTCGAAGTGA TGGAAACGCC AACCCCGGTG TCGGCGCTGC TGCACGCCGG TCTGCTCAAT
GCGGGCATCT TCCTGGTGGT GCGCTTTGGC GAACTGGTGT TCCTGTCGAC CCCGGCGCTG
ATTCTGTTGA TCGTGCTCGG CGGGTTCACG GCGATTTTCG CCTCGTCGTC AATGATTACG
CAGACCAGCG TCAAGGTCTC GCTGGCGTAT TCGAGCGCTG CGCATATGGG CTTTATGATT
ATGCTGTGCG GCTTTGGCGC GCACACGGTT GCAATTATGC ACCTCATCGC TCACTCCTGC
TACAAGGCGC ACGCCTTCCT GTCGTCCGGC AGCATCATCG AGTATGTGCG GGATACCGGC
GCCCAGAAAC TCGACACCGC GCCGCACCCG CTCAGTCTCC TGGCAAATAT GGCGGTTTCC
GTGGCGGTCT TTCTAGCGGT CGCCACTGCC ATCGGCATCG ACATCACCAA GCGACCGGGT
GAAACCGCGA TGATCACGAT ATTTATGATT GCCGTCGCCT ATTTGCTGGT GAAGGGCAAT
ACCGACAAAG CGCCCATCTC TGTGATCGGA CGCACGATGC TGATGGCTAC CCTGGTGACG
ATGGCCTTCT TCGCTCTGGA GGTCATGGCT GAGGCGCTGC TCGGCGGCGC TGTGGCGGTC
TATCCGCCGC TCGATATGCC GACGATGATC GCCGTGGTGC TGGCAGTTGT GCTCTTCGGC
ATCGTGATGG CGTTCAGCGC GTTCCTGCCT GCGCTGGTGA ATCGCCCCGC GTGGCGGGCG
CTCTATGTTC ACCTCAAGAA CGGTTTCTAT GCTAACGCTA TGTTCGACCG CTTCCTGGAC
GTCTTCCGAC TGGCTCGCTG A
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| Protein sequence | MEGMMGGNLA LIGYLAPLSL AVVALIAWLS RSVNLTFQLG RIASIGSFLL LLGLGIVVFT
SGPMVSPVIG VGEAGIALRL DALSVMMSWL VTLLGTLLIQ FSRNYLDGDP HQKLFFIRLY
LTVSAVLLMV LSGNLWQLVL AWIGMSLALH ELLVFYPERP RALRAARKKF ITARIGDVCL
IVAAVLLAQT FGTTDLGMIR EAAASALAGG TIPAGAAIAA ILIVIVAALK SAMFPFHGWL
LEVMETPTPV SALLHAGLLN AGIFLVVRFG ELVFLSTPAL ILLIVLGGFT AIFASSSMIT
QTSVKVSLAY SSAAHMGFMI MLCGFGAHTV AIMHLIAHSC YKAHAFLSSG SIIEYVRDTG
AQKLDTAPHP LSLLANMAVS VAVFLAVATA IGIDITKRPG ETAMITIFMI AVAYLLVKGN
TDKAPISVIG RTMLMATLVT MAFFALEVMA EALLGGAVAV YPPLDMPTMI AVVLAVVLFG
IVMAFSAFLP ALVNRPAWRA LYVHLKNGFY ANAMFDRFLD VFRLAR
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