Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0554 |
Symbol | |
ID | 5538017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 735511 |
End bp | 736560 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640892716 |
Product | alanine racemase domain-containing protein |
Protein accession | YP_001430702 |
Protein GI | 156740573 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCG ACGACCTTGA CACCCCGGCA GTTGTGATCG ATCTCGACCG CCTGGAGGCA AATATCGCCC GTTTTCAGGC GCATCTCGAC CGGCACGGCA TCGCCAACCG TCCCCACATC AAGACGCACA AGATTCCGCA GATCGCACAG ATGCAGATAG CGGCTGGCGC TGTCGGCATT ACCTGCCAGA AACTTGGCGA AGCGGAGGTC ATGGCGGACG CAGGCATCAC CGACATTTTT CTGCCCTACA ACATTCTTGG CGCCGCCAAA CTGGAGCGCC TGGTCGCTCT TGCCCGCCGG GTGCAGGTGA GCGTTACCGC CGATTCACCA GACGTCGTCA CCGGTCTGGG CGCAGCGATG TCCGGCGCCG GTCTGGAACT GCCGGTGCTC GTTGAATGCG ACACCGGTAT GGGGCGGTGC GGCGTGCAGA CCCCGGCGGA GGCAGCTGAA CTGGCGTTCC AGATCGCGCG CACGGCGGGA TTGCGTTTTG GCGGATTGAT GACCTACCCA TCGAGTCCGG CGATCGGTCC GTTTATGCGC GAAGCGGTAC GGCTTCTGCG CGAGCGTGGG CTTCCGGTCG AGCGGGTGAG CGGCGGCGGC ACGGCAGGCA TGTGGCATGC GCACGAACAC CCGGAAGTGA CCGAGTATCG CGCCGGCATG TACGTCTACG GCGACCGCTA TACCCTGCGC GCGGGCGCGC TGCGGCTCGA AGAGTGCGCA ATGTCTGTTC TGACAACCGT CGTCAGCCGT CCGACGCCGG ATCGCGGCGT GATCGACGGC GGCAGCAAGA CATTTTCGTC CGATCTGCTC GGTCTGGAGG GATACGGTCT CATCCTGGAA TATCCCGAAG CCAGGATCGT TAACCTCTCT GAAGAGCATG GCGTGGTGGA TTTCAGCCAA TGCGCGCAGA AACCTGCGAT TGGCGAAAGG GTGCGGGTGC TGCCGAACCA CTGCTGCGTC GTGAGCAACC TGTTCGATGA AGTGATCGGC GCGCGACGCG GCGAGGTCGA AACCATCTGG CGGGTGGCGG CGCGGGGCAC GGTGCGGTGA
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Protein sequence | MRIDDLDTPA VVIDLDRLEA NIARFQAHLD RHGIANRPHI KTHKIPQIAQ MQIAAGAVGI TCQKLGEAEV MADAGITDIF LPYNILGAAK LERLVALARR VQVSVTADSP DVVTGLGAAM SGAGLELPVL VECDTGMGRC GVQTPAEAAE LAFQIARTAG LRFGGLMTYP SSPAIGPFMR EAVRLLRERG LPVERVSGGG TAGMWHAHEH PEVTEYRAGM YVYGDRYTLR AGALRLEECA MSVLTTVVSR PTPDRGVIDG GSKTFSSDLL GLEGYGLILE YPEARIVNLS EEHGVVDFSQ CAQKPAIGER VRVLPNHCCV VSNLFDEVIG ARRGEVETIW RVAARGTVR
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