| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0550 |
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| Symbol | |
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| ID | 5538013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 730693 |
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| End bp | 731811 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892712 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001430698 |
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| Protein GI | 156740569 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAGTT GGATCAACAC GCTGATGACA ACGCGCGCGA CCGATCCTGA TGTGCAACGT
CGCGCGCTGA TCGTGATGCA ATTGATCATC ATGATGCTGG TGGCGAACGT GCTCTTTGCC
ATTCTCGCCA TCGTGTCGCC CGATGGTGGC AGTGTGCTGA TACCGGTTGC CAGCAGTGCG
CTCTTTATTG GCGCGTATGC GCTAGCGCAG CGCGGGTATG CCAGCGTAGC CGCATGGATC
GTGGTCGGCG CGTTTCTCTC CGGTGCGCTC TTTGCCGTGG CAAATCTTGA TTCTGAACGC
AGCGTCAATG TCGGCTACTT TCTGACTGCC CTGATCGTCA TTGCGAGTCT GTCGCTCACG
CCGCCGCAGC TCTGGTTGGT GACCGGCGGG GTGACCGGCG GTTTTCTGCT GACGCTGATA
ACGGCGCATC CCGATCTCTG GAATCTTCCC AATGCGCGTC ATAATGTGCT CAACAGCAGT
GTCCTGCTTG TGGTTGTCGG GTTGGTCTCG TATATCGGGG CGCGTATTGC GCAGCGCACT
ATTCGTGATG CGCAGCAGGC GCGCCAGATG GCAGAGCAGG CACAGCACGA ACTGGCGCGG
GCGAATGCCG ATCTGGAAGA GCGCATTGCG GAGCGCACGT CGGAGTTGAG CCGGACTCTC
GCTGCGCAGC AGGCGTTGAC GGATGAGTTG CGTCGCAGCC TGGCGGCGCA GCAGGAGTTG
AGCCAGTTGA TCCTCGACCT TTCGTTGCCG GTGATTCCGG TACGCGACGG CACGGTGGTG
GTTCCGCTCT CCGGCACCAT CGATAGCGCG CGGGCGGCAA AACTGACCGA GAGCGTGCTC
AAAACCATTG AGCAGCGGAA TGTTGATACG GTCATTCTGG ACATCACCGG TGTTCCGATT
GTCGATACGC AGGTGGCGCA GGCGCTGGTG CGCACGGCAA GCGCAGCCCG ATTGATGGGA
GCGGAAACAA TTCTGGTCGG TATTCGCCCG GAGGTGGCGC AGACGCTCAT CGGCCTTGGC
ATTCACCTGG GATTGCGCAC GGCGGCGACG TTGCAGGAGG GGTTGGATCT GTCGGTCAGA
TACGTCAACG GAGCACTGCG GTCCAGGCAT GCTGTGTGA
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| Protein sequence | MRSWINTLMT TRATDPDVQR RALIVMQLII MMLVANVLFA ILAIVSPDGG SVLIPVASSA
LFIGAYALAQ RGYASVAAWI VVGAFLSGAL FAVANLDSER SVNVGYFLTA LIVIASLSLT
PPQLWLVTGG VTGGFLLTLI TAHPDLWNLP NARHNVLNSS VLLVVVGLVS YIGARIAQRT
IRDAQQARQM AEQAQHELAR ANADLEERIA ERTSELSRTL AAQQALTDEL RRSLAAQQEL
SQLILDLSLP VIPVRDGTVV VPLSGTIDSA RAAKLTESVL KTIEQRNVDT VILDITGVPI
VDTQVAQALV RTASAARLMG AETILVGIRP EVAQTLIGLG IHLGLRTAAT LQEGLDLSVR
YVNGALRSRH AV
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