Gene Rcas_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0538 
Symbol 
ID5538001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp715980 
End bp716225 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content45% 
IMG OID640892700 
Producthypothetical protein 
Protein accessionYP_001430686 
Protein GI156740557 
COG category[S] Function unknown 
COG ID[COG2442] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAC AACAACTTCT TGAACGTATT ACGCTCAATC CCAAGGTGAT GGCAGGGAAA 
CCTGTTATTA GGGGAACGCG ACTGACAGTA GAATATATCC TTAATTTGCT GGCTCATGGC
GCAACTATTT CCGAAATTTT GGAAGAATAC AACGGGCTGA CTCATGAAGA CATTCAAGCG
TGTCTGCTGT TTGCTACGAA AGCCTTGGCG AGCACGTCGT TTATGCCGTT AGGGGAATCT
GCTTGA
 
Protein sequence
MKEQQLLERI TLNPKVMAGK PVIRGTRLTV EYILNLLAHG ATISEILEEY NGLTHEDIQA 
CLLFATKALA STSFMPLGES A