| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0498 |
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| Symbol | |
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| ID | 5537961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 640486 |
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| End bp | 641835 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892660 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001430646 |
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| Protein GI | 156740517 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAG AGAGTGACAA TCAACCATTC GCGCGTCTCT CGCTACGCGC CAACTTTTCC
TGGACGTTCG TCGGGAATGT GGTGTATGCC GCGTGTCAGT GGGGCATGCT GATGGCGCTG
GCAAAACTCG GTTCGCCCGA AATGGTTGGC GTTTTTGCGC TTGGTCTGGC AATTACTGCG
CCGGTCTTCA TGCTCTCGAA CCTGCACCTG CGCACCATTC AGGCGACAGA TGCGCGACAA
CAGTATCAGT TTCGTGATTA TCTCGGCGTG CGCCTGGCAA CAACGACGCT GGCACTGCTG
GCAATTGCCG GCATCGTGCT GGCTATCGGG TATCCGTGGC AGACGAGTTT GACCATTTTT
GCAGTCGGAT GCGCAAAGGC GTGTGAATCG ATCAGCGATA TTTTCTATGG TCTGCTCCAA
CGCCTCGAAC GGATGGATCG GATCGCCTGG GGCATGATCC TGAAAGGCGC GATGTCGCTA
TTCGCTCTGG CGACCGGCGT CTATCTCAGT GGATCGGTGT TGTGGGGCGT AGTCGGAATG
GCGGGCGCGT GGGCAACAGT GCTGGCAGTG TACGACATCC CTCAAGGTCT CTCTGCGGTG
CGGGGTGCTT CGATAGTGCA TCCATCGGCG GCGCCCCGGC AGCGCATGGC GGTCGCACGA
AACCTGGCAT GGATGGCGCT GCCGCTCGGC GTCGGGATTA TGCTGGTCTC TCTCAGCACG
GCGATCCCGC GCTATTTCGT CGAGCGCATG CTGGGGGCGG AGAGTCTGGG TATTTTCGCT
GCCATCGCCT CCATTCAGGT TGCCGGCACG ACCGTGATCG GCGCGCTCGC TGCCGCTGCC
AATCCACGTC TGGCACAGCA CTACGCCGAC GGGAATGTGC GCGCCTTCCG CGCGCTGCTC
CGCAACCTCG TCGCCATTGC CGTGGCGTTG GGTGGCATCG GTGTGCTGAT CGCGTGGCTG
ATCGGCGGCT GGATTCTGAC GATGATCTAT CGACCGGAGT ACGGCGCCTA CAACCATATC
TTCGTTCTGG TCATGATTGC CGCAAGCGTT GGCTACATTG GCTGGTTCGT CGGCGATGCG
ATGACGGCGG TGCGGCGCTT GCGCGCACAG GCGTTTCTCT TTCTGGCGAT GACGGTCGCA
ACCATCGGCG CCTGCGCCTG GTTGATCCCG TCATTCGGGC TGACCGGCGC GGCGCTGGCG
ACGATGGTCA CATCCGTGAT CCATGCAGTG GGTGGGTTGC TGATGGTCGA GCATGCGCTG
CACGCGCTGC CCTCAGCCCA GGAAGATGAT CGTGAGCAAA CTTCCTGGCG GCGCTCCATC
TCACAAGTAC GACCAGGAGT GAAACGATGA
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| Protein sequence | MTAESDNQPF ARLSLRANFS WTFVGNVVYA ACQWGMLMAL AKLGSPEMVG VFALGLAITA
PVFMLSNLHL RTIQATDARQ QYQFRDYLGV RLATTTLALL AIAGIVLAIG YPWQTSLTIF
AVGCAKACES ISDIFYGLLQ RLERMDRIAW GMILKGAMSL FALATGVYLS GSVLWGVVGM
AGAWATVLAV YDIPQGLSAV RGASIVHPSA APRQRMAVAR NLAWMALPLG VGIMLVSLST
AIPRYFVERM LGAESLGIFA AIASIQVAGT TVIGALAAAA NPRLAQHYAD GNVRAFRALL
RNLVAIAVAL GGIGVLIAWL IGGWILTMIY RPEYGAYNHI FVLVMIAASV GYIGWFVGDA
MTAVRRLRAQ AFLFLAMTVA TIGACAWLIP SFGLTGAALA TMVTSVIHAV GGLLMVEHAL
HALPSAQEDD REQTSWRRSI SQVRPGVKR
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