Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0495 |
Symbol | |
ID | 5537958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 636529 |
End bp | 637692 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640892657 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001430643 |
Protein GI | 156740514 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGTT TATTGATTGT CACAACGGTG CCGGCGACGC TCTCGGCGTT TCTGATTCCA TTTGCGCATC ATTATCGCAC CAGCGGCTGG CGCGTCGACG CTATGACGCG CGATGAGGTG ATTGACCCTG AGACGCGCGC CGCATTCGAA TATATCTGGA CGCTCCCCTG GTCACGCCGG CCATTCACTC CGGTCAATCT GATCGGAACG CCGCAGCGAA TCCGGCGGAT CGTCGAACGC GAGCGGTACG ACATTGTTCA CGTGCATACC TCAGTCGCCG CTTTTGTGAC GCGCTACGCG TTGCGCGATG TCCGGCGGCG CACCGGCGTC CGCGTGATCT ATACGGCGCA TGGCTTCAAT TTCGACCAGA GTATGCCATG GCACAGGAAT CTCGCCTTTC TAACGCTGGA AAAGATCGCA AGCGCCTGGA TGGATTATCA GGTGGTGATC AACCGCACCG ACGAGCAGGC GGCTATTCGC CACCGTCTCG CGCCGCCGGA GCGAGTCTGG TACATGCCGG GCATCGGTGT CGATCTGACC CATTACCGAC CGGATCGCGT CGCTGCGGCG GAGGCAACGA CGCTGCGCCT GCTCATGGGA GTCGCGCCCG ATGCGGCGCT GTTTCTGATG ATTGCCGAGT TTATTCCGCG CAAGCGCCAT GCCGATGCAT TGCAGGCGTT TGCGCGCCTG GAGCGGCAGG ACGCGCACCT GGCGCTGGCA GGAACCGGAC CATTGCTCGA ATCGATGCGG CGCCTGGCGA CCGACCTCGG CATTGCGAAA CGAACCCATT TTCTCGGCTA CCGACGCGAC ATTCCGGCGT TACTTCGGGC GGCGACGGCG CTCCTTCTCC CCTCGCAGCA GGAAGGATTG CCGCGCAGCA TCCTGGAAGC CCTGGCGCTT GGAGTGCCGG TGATCGGGTC GGACATTCGC GGCGTGCGCG ACCTGCTGGC GGACGGCGCC GGTCTGCTCG TGCCGGTTGG CGACGTTGCG GGACTGGCGC AGGCGATGTG GCGGATCATC AATGACCAGA AGGCGGCGCA GGCAATGGCG CAACGTGGCT TGGAGCAGGC GAAGCGGTAC GACCTGCGGC GCATCATTGC ACTGCACGAC CAGTTGTATA CGGCGGCGTT GAGTGAGCGA CATGCCCTGG CGCCAACCAT CTAG
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Protein sequence | MPRLLIVTTV PATLSAFLIP FAHHYRTSGW RVDAMTRDEV IDPETRAAFE YIWTLPWSRR PFTPVNLIGT PQRIRRIVER ERYDIVHVHT SVAAFVTRYA LRDVRRRTGV RVIYTAHGFN FDQSMPWHRN LAFLTLEKIA SAWMDYQVVI NRTDEQAAIR HRLAPPERVW YMPGIGVDLT HYRPDRVAAA EATTLRLLMG VAPDAALFLM IAEFIPRKRH ADALQAFARL ERQDAHLALA GTGPLLESMR RLATDLGIAK RTHFLGYRRD IPALLRAATA LLLPSQQEGL PRSILEALAL GVPVIGSDIR GVRDLLADGA GLLVPVGDVA GLAQAMWRII NDQKAAQAMA QRGLEQAKRY DLRRIIALHD QLYTAALSER HALAPTI
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