| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0469 |
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| Symbol | |
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| ID | 5537932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 601840 |
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| End bp | 603414 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892632 |
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| Product | glycosyltransferase |
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| Protein accession | YP_001430618 |
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| Protein GI | 156740489 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.171688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.657168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGTC CAGAAGCGCA CAGCGCTCCA CATCTTCAAA CAACGCCAAT GACCGTTGGC
GCCTCTCGGA TTCTTGTGGC AACGCTGTTT ATCGTGGCAG TGTTGCTGGC GACGATCAAT
CTGCCATATG CGCCGCGGAC CTGGTTTGAT GAGGGATCGC ACCTGCACGT GCCGAAAGCA
TTGGTGCAGT ACGGCAAGTA CGCCGACATC AGCGCCATCC CTGATGGACG CATCGAGTTT
CGCTACCACG GACCCACGAT TGGTATCGGT CCGACCATTA TGCTGCCGGT TGCGGCGGTC
TACCAGGTGT TCGGTGTCGG TCTGACGCAA GGGCGACTGG TAATTGTGAT CTATTTTGCC
ATTGCGCTTG TTGCCGGATA TGCGCTTGCG CGTCGTCTGT ATGATCGCCA GACTGCACTG
ATCGCGCTGG CGCTCCTGCT GGCGTCACGC ACGGTCAATT ATGAGGGGCT GATCGAGTAT
GGGAGGCAGG TGCTCGGCGA GGCGCCCGGC GTGGCATTCG TCTTTCTGGG AATGCTGGCG
TGGCTGACGG CGTTGAAGAC AGCAGCGCAA CCGGCGCTGC GGCATGCGCA CCGGACGTGG
AGCATACTGG CGGGGCTGGG GTTTGGTCTG GCGTTGGTCA CCAAGAACCA ATTTGTGCTG
ATTATCCCGC CGGCGCTGGC GCTGACAGCG TTGCTCGACT GGCGCTACTA TCGGGCGGGA
ACCTGGACGC TGCGCCTGAT TCCGCCGATT GTTGCTGTTG GTTGTTTTGC GCTCTGGACG
GTCGTGCAGT TTGCGCTGCT CGGTCCTGGC ACATTCTTTG AAAATCTTCA GCAAACCCGG
CAGGCTGCTG GCGGGGCGAT TTTCGTTTTC AACCTGCGTT CGACCCTGCG CGCCGGGTAT
TACCTGTTGC GTCCCGATCT GTTCGGCGGG CTGGTTGTGC CGGCGCTGGC ATACACTATC
TGGCGCGCGC GCCGCCGCAC ATCGCAGGGG TTGAACGAAG CGCTGCTGGC ACTGATCATT
GGTCTCTGGC TGGCGTGGTT CGTCGGCGTT TCCCTCGGCT GGCCCCGCTA CGCCTTTCCG
GCAGTCGCAC TGAGCGCTCT GACCGTCGCG CGGCTGGCAT TCGATACGAT TGTCTGGCTG
CGCCGCGTGT TGCCGGCGGC AGCAACAATT GCCGCCATCT ACCTGGTTGT CATCATCGTG
CTGCCGATGG CACTAACAGT GCGCGTGGTG TTCACGCCCG ATGATAGTGC ACAGCGGTTC
GCCGCATATC TGAATGCGAA TGTGCCTGAA TCGGCGATCA TTGCTACCTG GGAGCCGGAA
TTGGGGGTGC TGACCGATCA CCGCTATCTC TACCCGCCCC AACCGACCCT GGATCAGGCA
GTGCGGCACA CCTGGCTGGG AGGTGATCCG GTGCGCTACG ACTGGTACGC AGATCGACCG
GAGTATGTTG TGGTCGGCAG TTTCGGCGGT TATACCGGCG TGTACCATAC GCCCGAACTG
GAACGCCACT ATATTCGTGT GGCGCAGATG GGTACGTATG CGTTGTACCA GGTTCGGGCG
GGGAGTGGGG AGTAG
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| Protein sequence | MIRPEAHSAP HLQTTPMTVG ASRILVATLF IVAVLLATIN LPYAPRTWFD EGSHLHVPKA
LVQYGKYADI SAIPDGRIEF RYHGPTIGIG PTIMLPVAAV YQVFGVGLTQ GRLVIVIYFA
IALVAGYALA RRLYDRQTAL IALALLLASR TVNYEGLIEY GRQVLGEAPG VAFVFLGMLA
WLTALKTAAQ PALRHAHRTW SILAGLGFGL ALVTKNQFVL IIPPALALTA LLDWRYYRAG
TWTLRLIPPI VAVGCFALWT VVQFALLGPG TFFENLQQTR QAAGGAIFVF NLRSTLRAGY
YLLRPDLFGG LVVPALAYTI WRARRRTSQG LNEALLALII GLWLAWFVGV SLGWPRYAFP
AVALSALTVA RLAFDTIVWL RRVLPAAATI AAIYLVVIIV LPMALTVRVV FTPDDSAQRF
AAYLNANVPE SAIIATWEPE LGVLTDHRYL YPPQPTLDQA VRHTWLGGDP VRYDWYADRP
EYVVVGSFGG YTGVYHTPEL ERHYIRVAQM GTYALYQVRA GSGE
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