| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0466 |
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| Symbol | |
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| ID | 5537929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 594428 |
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| End bp | 596032 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892629 |
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| Product | glycosyl hydrolase BNR repeat-containing glycosyl hydrolase |
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| Protein accession | YP_001430615 |
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| Protein GI | 156740486 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.125416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.453675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC TGACGATACT GATTGCCGGT CTTCTGGTAG TCATCAGTCT GGCGCTGTCG
CACTCCCCGG CAGCGGCGCA GCGCAGCCGC TGGACGACGC CCTTTGAGGT GTCGCCGCCG
GTCACGGAAG CGACGTCAGC GCAGGCAGCG CCAACTCCGC CTCCTGCCGG ACAGAAGGCG
GTGCGCTATG GCTCATCGTG GTTTCCAAGC CTTGCCATCG GTCCAACGGG GAGCGTTCAT
ATTGTATGGT ATGGTGGCAT TGTCACCACT GCCGGCAATG AGGGGTCTAT CGATCTCCTC
ATGTACCGCG AGTTGCGTGA CGGCGTCTGG TCGCCGTTCA ATGATGTCGT GCAGACTGCA
ACAGGCGGAT ATACCGTTCG CAACAGTATT GTTATGAGTC GTGACGGGAA ATTGCACGTC
TTGCTGCGCA TGGGCACGAC GATCCGGCAT GTCAGCGTTC CATGGGATCG GGCGTGGACC
GCAGCGGCCT GGAGCGAACC GCGAACGGTT GGCAGGAGCG GTTATTACGT GGCGCTAGGA
GTGGACAGTC AGGCGCGATT GCATGCCTTC TGGTCGCAAG GAGTCCCGGA CGAACCGGGT
AAGCCGCGTC CCGAATGTCC GAACTGCGCT AATCTGTTCT ATCGCTATTC CGATACTGGT
GGCGAAAGCT GGTCGGAACC TGTGAACCTG TCGAATTCGC CCTATGGCGA TAACCGACCA
CAAGTGAAAG TGGATAGTCG TGACCGGGTG CATGTCATAT GGGATCAGGG GAAAGACTGG
TATGCCGGTC TGGGCAAACC AAAGCAGGGG GTGTACCGTC GCTCGGATGA TCGCGGCAAC
ACCTGGCGAC CGCCGGTTTA TTTCACCGTT CCTGACGATG CGATCCAACA GACCACTCTC
GGCATTGCGG CGGGCGATAA CCCGATCGTC GTCTATCGCA CGCTCAAGGG AACGCTCTAC
TACCAGTACT CGCGTGATGG CGGCGATAGC TGGAGTCTGC CAGACGTGCT GCCCGGCGTT
GTTGCGCGAG ATACCCGCGG GAATGATCTC GACCAGTACT CCATGGCTAC CGATAGTGAA
GGGAATGTCC ATCTCCTGAT GGTTGGCTAC CCGACGACAA TATCCAGCAT CGCTCCTGGC
GCCGCGCCGT CGATGGTGTT GCACCTGGTG TGGAATGGCT CGCGCTGGAG TTCGCCCGAA
ATCGTGTCGG CAAACGAGTT CTATCCCGAA TGGCCCGTTA TTGCCGTGTC GAACGGCAAT
AAACTCCACG CCGTCTGGTA TACACGCCGG GGAGACGGCA TAGCAGCAGA CGAGCGCGAC
CGCTATCGTA TCTGGTATAG TTCGCGCCAG CTGGATCTTC CGGAAACTGC ACCGCTGCCA
CTGTTTACGC CGGTTCCGAC GGCGGTGCCA ACCGCTGTGC CTACTGCAAC TCCAATTCCT
CCCACGTCCA CTCCCCTTCC AACCGATGTT GCGACCGCGC CACCGATCAG CGGTCCTCCC
CGCTGGGAGA CGACGGCGCT GCCGGTGCTG GCGCTGGCAC TGCTGCCGCC TATCGGGGTC
ATTGCCGGTG TTTATGCCTT GCGTCGATGG GGGAAACGCC GATAG
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| Protein sequence | MKRLTILIAG LLVVISLALS HSPAAAQRSR WTTPFEVSPP VTEATSAQAA PTPPPAGQKA
VRYGSSWFPS LAIGPTGSVH IVWYGGIVTT AGNEGSIDLL MYRELRDGVW SPFNDVVQTA
TGGYTVRNSI VMSRDGKLHV LLRMGTTIRH VSVPWDRAWT AAAWSEPRTV GRSGYYVALG
VDSQARLHAF WSQGVPDEPG KPRPECPNCA NLFYRYSDTG GESWSEPVNL SNSPYGDNRP
QVKVDSRDRV HVIWDQGKDW YAGLGKPKQG VYRRSDDRGN TWRPPVYFTV PDDAIQQTTL
GIAAGDNPIV VYRTLKGTLY YQYSRDGGDS WSLPDVLPGV VARDTRGNDL DQYSMATDSE
GNVHLLMVGY PTTISSIAPG AAPSMVLHLV WNGSRWSSPE IVSANEFYPE WPVIAVSNGN
KLHAVWYTRR GDGIAADERD RYRIWYSSRQ LDLPETAPLP LFTPVPTAVP TAVPTATPIP
PTSTPLPTDV ATAPPISGPP RWETTALPVL ALALLPPIGV IAGVYALRRW GKRR
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