Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0464 |
Symbol | |
ID | 5537927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 591780 |
End bp | 592964 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640892627 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001430613 |
Protein GI | 156740484 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.57819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG GCATCGATGC GCGTTTTCTG ACTCACCCGC AACCCGGCGG CTTCAAAACC TACACCGAAC AGTTAGTTCG TGCACTGCTA AACGTCGATG CTGAGAATGA ATATATTCTG TATGTTGACC GTCCGCCCGA CGCGCGCATG GTCGCATCAT TGACGCCGAA TGCAACCGTG CGCATCGTGC CGGGGACGGC GCCGTTTATC GGCATGCCCT GGCGCGAGCA GGTCGGGCTG ACCGTGCAAG CAAAGCGTGA CCGGATCGAC ATCCTTCACG CACTCTGCCT GACAGCGCCG GTGCGTGCGC CTTGCCCGCT GGTTGTGACG ATCCACGATA CCATCTGGCT GTCTCCCCAT CGTTTTACAG GGCGGCGGAA ACGAGCGCAG CGCTCCTTGA TGGATATGTA CTATCGGTAT GTGCCACAGA TCGCAGCCCG GCGGGCAAGC GCGGTGGTGA CGGTATCGCA TGATGCGCAA GCGGCGATTG TGCAGCATCT TGGCATCCCT GCGCATCGCG TGTTTGTTAC CTATGAAGCA GCGGCATCGA TCTATCGCAC TCGTGATCGG GCGCTTGCGA TCAATGCTGT GCATGAGCGA TTTGGTCTGA GCAAAGGGTT TATTCTGGCG CTTGGGTCCG CCGATCCGCG CAAAAACATT TCCACGCTTA TTCGCGCATA TGCTCATGTA CCGGAACACA TGCGAATACA CCACGAACTC GCAATTGTGT GGACGCACCC ATTACTGGCG GAGTCGATCC TGGCGGAAGC GCGTGTGCGT GGTGTCGAAG GGCAATTACG CTTCTTGCGG CAGGTCTCGA ACGATGATAT GGTCAATCTC TACAATGCTG CGGCGCTGTT CGCTTTCCCG TCGCGGTATG AGGGATTCGG TCTGCCGATC CTGGAGGCGA TGGCATGCGG CACACCGGTT GTGGCTGCGA ACAATTCGTC GATTCCGGAA GTTGCCGGCG AGGCGGCGCT ACTGGTCGAT GCCGAGAGTC CATTAAGCAT CGCTCGTGCA ATAGAGCGCC TGTTGAACGA TGCCTCGCTG CGCGATGAAC TGCGCGCGCG GGGCATACAG CGTGCTGCAA GTTTCTCATG GCAACGCTGT GCGCGTGAAA CGATTGCGGT CTATCAGAAG TGCTCCATCG GTCGTGAGGA TGTTGGCGCG ATGCGTGTTG TCTGA
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Protein sequence | MKIGIDARFL THPQPGGFKT YTEQLVRALL NVDAENEYIL YVDRPPDARM VASLTPNATV RIVPGTAPFI GMPWREQVGL TVQAKRDRID ILHALCLTAP VRAPCPLVVT IHDTIWLSPH RFTGRRKRAQ RSLMDMYYRY VPQIAARRAS AVVTVSHDAQ AAIVQHLGIP AHRVFVTYEA AASIYRTRDR ALAINAVHER FGLSKGFILA LGSADPRKNI STLIRAYAHV PEHMRIHHEL AIVWTHPLLA ESILAEARVR GVEGQLRFLR QVSNDDMVNL YNAAALFAFP SRYEGFGLPI LEAMACGTPV VAANNSSIPE VAGEAALLVD AESPLSIARA IERLLNDASL RDELRARGIQ RAASFSWQRC ARETIAVYQK CSIGREDVGA MRVV
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