Gene Rcas_0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0459 
Symbol 
ID5537922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp584972 
End bp585883 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content62% 
IMG OID640892622 
Productglycosyl transferase family protein 
Protein accessionYP_001430608 
Protein GI156740479 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGGA TGTCTCCCCG AGTCTTGATT ATCATCCTCT GCTACAACGG CGTTGCCGAC 
ACACTGGCGT GCCTGGAGTC GTTGCAGCGC GTCGAGTATC CGTCGTTCGA CCTGCTGGTG
ATCGATAATG CGTCGAGCGA CGGTACGCCG GAGGTGGTGC GCGCGCGGTT TCCGCAGGTC
AAGGTTATCG AGAACGGCGC CAACCTCGGT TTTGCCGCCG GCAATAACGT CGGGTTGCGC
TATGCGCTGC GCCATGGGTA CGATTACGCC TTGCTGCTCA ACAACGATAC TGAAGTCGCG
CCAGACTTCC TGGCGCGCCT GATCGATGCC GCCGAGTCGG ACCCGAAGAT TGGCGCCGTG
GGACCGACGA TCACCTACTA CGAGCGTCCC GACCTGATCT GGTCGGCTGG CGGGATGATC
GACTGGAAGC GCGGTATTGC CGTCATGCGC GCGAATGAAG TCGATAGCGG GCAATACCAT
GAGCCGGCCG ACGTCGATTT CGTGACCGGA TGCGCGCTCC TGGTCAAACG CGCAGTTTTA
GAGCGCGCCG GGTTGCTCGA TGAGCGGTTC TTCATGTATT TCGAGGAGAC CGAATGGTGC
GTGCGCATCC GCCGTGCCGG GTTCCGCATT CTGCACGTGC CGCGATCGCG CGTTTTACAT
AAGATTCCCC TTAATGCTCG CTTCGACAAA GAGTACCTGG CGTACTACAT GACCCGCAAC
CGTCTCCTCT TCCTGCGCGC AACCGGCGCG CCGCTCCGCG CGTGGCTCGA TGCGCTCCTC
ATACAAGACC TGCGCACCTA CCTCAGCATG GTAATGCGCC CGAAATGGCG CACGCGGTCG
GGACGCATCG GGATGCGCCA CGCCTGGATC GACTTCTGGC GCGGACGGTT CGGGAAGTGG
GAGATGAGGT AA
 
Protein sequence
MRRMSPRVLI IILCYNGVAD TLACLESLQR VEYPSFDLLV IDNASSDGTP EVVRARFPQV 
KVIENGANLG FAAGNNVGLR YALRHGYDYA LLLNNDTEVA PDFLARLIDA AESDPKIGAV
GPTITYYERP DLIWSAGGMI DWKRGIAVMR ANEVDSGQYH EPADVDFVTG CALLVKRAVL
ERAGLLDERF FMYFEETEWC VRIRRAGFRI LHVPRSRVLH KIPLNARFDK EYLAYYMTRN
RLLFLRATGA PLRAWLDALL IQDLRTYLSM VMRPKWRTRS GRIGMRHAWI DFWRGRFGKW
EMR