Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0450 |
Symbol | |
ID | 5537913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 567682 |
End bp | 568404 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640892613 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001430599 |
Protein GI | 156740470 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.667735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGG TCAATCTTTA CCTCTCGCGC CAGGCATCGT CGATTGGTCG GTATATCTGG GAGCAGATCG TCCAGGCGGC GGCGGGATGG ATTCCCGGTA TCGTCGGGAT TGGCGTGCGG GCGGTTTTGT ATCGCGCAAT CCTGCACATG GACGGTGTGG CAGCCATCGA GGAGGGCGTG CGCATCCGCT TTGCCGATAA TGTGCGCCTG GGGCGCGGTG TGTATCTCGA TCATGGCGTC TACCTGCACG CCTGTCCTGG CGGTATTTCC ATCGGTCCCG ACAGTTATGT GATGAAGAAT GCCATCCTGC ACGTCTACAA TTTCCGCGAT CTGCCGCGTG CTGGCATTCG GATCGGCGCC CGGTCGCTGA TCGGCGAGGC GTGCATTTTG CGCGGGCAGG GCGGCATTAC CATCGGCGAT GATGTCTTTC TTGCGCCGCT GGTGCAGATG CTGGCGGTCA ACCATGTGTA TCACGACACG AGCCGACCGA TCAGTCTTCA GGGGATTACC TGCCAGGGGA TTACGGTCGA GAATGGCGCC TGGATCGGCG GCGGCGCAAT TATCCTGGAC GGGGTCCGCA TCGGTAAAAA CGCTGTTGTT GGCGCCGGCG CGGTCGTCAC CCGCGATGTG CCCGATTACT GCGTCGCCGT CGGCAATCCG GCGCGCATCG TGCGCGATCT GCGCAGTCAG CCGGCGGCGC CAGCGAACGT TCCGGTGTAT TGA
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Protein sequence | MKQVNLYLSR QASSIGRYIW EQIVQAAAGW IPGIVGIGVR AVLYRAILHM DGVAAIEEGV RIRFADNVRL GRGVYLDHGV YLHACPGGIS IGPDSYVMKN AILHVYNFRD LPRAGIRIGA RSLIGEACIL RGQGGITIGD DVFLAPLVQM LAVNHVYHDT SRPISLQGIT CQGITVENGA WIGGGAIILD GVRIGKNAVV GAGAVVTRDV PDYCVAVGNP ARIVRDLRSQ PAAPANVPVY
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