Gene Rcas_0433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0433 
Symbol 
ID5537896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp546966 
End bp547388 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content60% 
IMG OID640892596 
ProductNUDIX hydrolase 
Protein accessionYP_001430582 
Protein GI156740453 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.942987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC AGCCTGACGC GGCGGGATGT GTCGTCTATC GCTACGACGA ACGCGGGCAG 
CCGCTCATTC TGTTGATCCA CGACCAGTAT GGCAAATGGA CGCTGCCCAA AGGTCACCTC
GACGACGGCG AGAGCGCCGC AGAAGCGGCG GTGCGCGAGG TGCGCGAAGA GACTGGGATG
ACCGGTGAGT TGGGGGCGTT TGTCGGAAGT GTTACGTATA TGGTTCAGAA GAAAAGCAAG
CCGTATCGGA AGCGCGTTGA CTTTTTCCTG ATGCACGCCG ACGGTGGGGA CGCTGTGCCA
GAAGCGGAAG AGGGGATCAG CGCCGTCGCC TGGTTCCCTC CCCATGAAGC GCAGATGCGC
GTCGGATACC ATCAGATCCG CGACATCATT GTCCGCGCCA CGAAGATAAT CCCGTCACCG
TGA
 
Protein sequence
MNDQPDAAGC VVYRYDERGQ PLILLIHDQY GKWTLPKGHL DDGESAAEAA VREVREETGM 
TGELGAFVGS VTYMVQKKSK PYRKRVDFFL MHADGGDAVP EAEEGISAVA WFPPHEAQMR
VGYHQIRDII VRATKIIPSP