Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0433 |
Symbol | |
ID | 5537896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 546966 |
End bp | 547388 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640892596 |
Product | NUDIX hydrolase |
Protein accession | YP_001430582 |
Protein GI | 156740453 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.942987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATC AGCCTGACGC GGCGGGATGT GTCGTCTATC GCTACGACGA ACGCGGGCAG CCGCTCATTC TGTTGATCCA CGACCAGTAT GGCAAATGGA CGCTGCCCAA AGGTCACCTC GACGACGGCG AGAGCGCCGC AGAAGCGGCG GTGCGCGAGG TGCGCGAAGA GACTGGGATG ACCGGTGAGT TGGGGGCGTT TGTCGGAAGT GTTACGTATA TGGTTCAGAA GAAAAGCAAG CCGTATCGGA AGCGCGTTGA CTTTTTCCTG ATGCACGCCG ACGGTGGGGA CGCTGTGCCA GAAGCGGAAG AGGGGATCAG CGCCGTCGCC TGGTTCCCTC CCCATGAAGC GCAGATGCGC GTCGGATACC ATCAGATCCG CGACATCATT GTCCGCGCCA CGAAGATAAT CCCGTCACCG TGA
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Protein sequence | MNDQPDAAGC VVYRYDERGQ PLILLIHDQY GKWTLPKGHL DDGESAAEAA VREVREETGM TGELGAFVGS VTYMVQKKSK PYRKRVDFFL MHADGGDAVP EAEEGISAVA WFPPHEAQMR VGYHQIRDII VRATKIIPSP
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