Gene Rcas_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0427 
Symbol 
ID5537890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp540710 
End bp541504 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content62% 
IMG OID640892590 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001430576 
Protein GI156740447 
COG category[R] General function prediction only 
COG ID[COG3393] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.115706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGC TCATCCTTCA CGACAAACGC ACCATTGAAA CCTATCTGCG CCGGAATCCG 
GCGTTGCATG TTTACGAGTT GGGCGATCTC GACGATTTCT TCTGGTCCCG CACCATCTGG
TATGGCTTGC GGGAAGGCGA CCACATCCAG GCGCTGGCGC TGCTCTACAC CGGAGGCGAT
CTTCCCGTTC TCCTGGCGAT GGCGCCCCCA CCGGCGACGG CACTCGCGGC ATTGCTGGCT
CAGGCGATGC CACTGCTTCC GCCACACTTC TACGCGCACC TGTCGCCCGA AGCGCGCGAT
GCGCTCACCT CGCACTACAT CCTCGAACCT CACGGTCCAC ACCTGAAGAT GGCGCTGACA
AACCCGGATC GTCTTGCGGG CATCGACACC AGTGTGGTTG AACGCCTGAC ATCGGCGGCA
ACCGATGAAC TCCAGGCGCT CTACGCGCGC AGTTATCCGG GAAACTGGTT CGACCCGCGC
ATGCTGGAGA CCGGTCAATA CTTCGGCGTG CGCGATGCCG ACGGCGTGCT GCTCAGCGTC
GCCGGGGTGC ATGTCTACTC AATGGAGCAA CGGGTTGCGG CATTGGGCAA TATCACCACC
CTGCCATCAG CTCGCAGTCG TGGGCTGGCG ACAATGGCAA CTGCGGCGCT CTGTCGTTCG
CTGCTGCGCA CCGTCGATCT CATCGGTTTG AATGTGCGTG CGGACAACAC TGCCGCAATC
GCCTGCTACC GTCGCCTCGG GTTTGACGTT GTGGCGGAAT ACGAGGAGCA CCTGCTGCAT
TATCGGGGAT ACTGA
 
Protein sequence
MAALILHDKR TIETYLRRNP ALHVYELGDL DDFFWSRTIW YGLREGDHIQ ALALLYTGGD 
LPVLLAMAPP PATALAALLA QAMPLLPPHF YAHLSPEARD ALTSHYILEP HGPHLKMALT
NPDRLAGIDT SVVERLTSAA TDELQALYAR SYPGNWFDPR MLETGQYFGV RDADGVLLSV
AGVHVYSMEQ RVAALGNITT LPSARSRGLA TMATAALCRS LLRTVDLIGL NVRADNTAAI
ACYRRLGFDV VAEYEEHLLH YRGY