| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0419 |
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| Symbol | |
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| ID | 5537881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 531724 |
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| End bp | 532668 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892581 |
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| Product | ABC transporter related |
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| Protein accession | YP_001430568 |
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| Protein GI | 156740439 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00150824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGA TTGAAACCTG TGATCTGACC CGCGCCTTTG GCGAGCGCGT TGTGGTTGAG
CGCCTGACAC TCGCAGCGCC GCGCGGCGCG GTGTTTGGCT TTCTTGGTCC AAATGGCGCC
GGGAAGACTA CCACAGTGCG CATGCTGGCG GCATTGATCG CACCAACCTC CGGCAGTGCG
GTGGTGGCAG GGTATCGTCT CGGCGAAGAC GATCAGATGA TCCGGCGTCA TGTCGGGTTG
CTCACTGAAA GCCCTGGATT GTATGATCGC CTTAGCGCGC GCCAGAATCT GATCTTCTTT
GCGCGCCTCT ACGATCTCGA TACACCCCGC GCCGGGATGC AAACGGAGCG GTACCTGCGC
ATGCTTGGGC TGTGGGAACG GTGCGATGAT CCGGTCGGCA GTTTTTCAAA GGGTATGCGA
CAGAAACTGG CCATTGCGCG CGCCCTGCTG CACGAACCAC AGATTATCTT TCTCGACGAG
CCAACCGCCG GTCTCGACCC GGAAGCTGCG CGCACCGTGC GTGAGTTCAT CAAGGAGTTG
CGCGCCGAGG GACGGACCAT TTTCCTGACG ACTCATAATC TTCCAGAAGC TGACGAGTTG
TGCGATTTGA TCGCCGTCTT TCGCATACGT CTTCTGCGTA TTGGCGCCCC TGCGGCCTTG
CGCGCTGAAC TGTTCGGCGC TGGCGTGCGC ATCCGTATTG CAGGCGCCGC CGAATCTTTC
ATGGACGCAG TGCGCGCCCT TCCGTTCGTT CACGCCGCCG CCGCTGACGG TGACGCGCTG
AACGTCTCGC TCGACAACCC CGATGAGCAC AACCCGATCC TGGTGCGCGC GCTGATCGAT
GCCGGCGCCG CTATCCGGTA TGTCGAACCG CGTGAACCTA CGCTGGAAGA CGTCTATCTG
CAACTGGTGC GCGAAGGAGA ACCGCAGGAG CAGACATATG CGTAA
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| Protein sequence | MNAIETCDLT RAFGERVVVE RLTLAAPRGA VFGFLGPNGA GKTTTVRMLA ALIAPTSGSA
VVAGYRLGED DQMIRRHVGL LTESPGLYDR LSARQNLIFF ARLYDLDTPR AGMQTERYLR
MLGLWERCDD PVGSFSKGMR QKLAIARALL HEPQIIFLDE PTAGLDPEAA RTVREFIKEL
RAEGRTIFLT THNLPEADEL CDLIAVFRIR LLRIGAPAAL RAELFGAGVR IRIAGAAESF
MDAVRALPFV HAAAADGDAL NVSLDNPDEH NPILVRALID AGAAIRYVEP REPTLEDVYL
QLVREGEPQE QTYA
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