| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0415 |
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| Symbol | |
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| ID | 5537877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 525416 |
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| End bp | 526963 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892577 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001430564 |
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| Protein GI | 156740435 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.866195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACATCG GAGATTGGCT GGCGCGGCGA GCCGATCTAA CGCCGCACAG GATTGCACTC
CTGGACGCCG CTGATAACCT TCGACCGATC ACGTTTCGCC TGTGGCATAC GAATGTCAGT
CGCACTGCTC GATTCCTCGC TGGACGGTTT GGAGTACAGC CTGGCGACCG GGTGGCGGTG
CTGGCGATGA ATTGCGTCGC CTATCTGGAT ATCTGGTTCG CCTGCGGTAA ACTCGGCGCC
ATTCTCCAGA ACCTCAACTG GCGGCTCACA CCAACGGAAC TTGCCGGACT GATCGCCGAT
GCCGAACCGG CGCTTCTGAT TTACGGACCG GATTTCGTCG AACAGGTGCG CGCGCTGCGC
AGTGCCGGGA TCGTGACTCC AGGCATTGCA CTCGATGCCG ACTGCCGCGC CGATCCTGGC
GACCCCGTTT TTGCCGAACG CGACGCATAC CCCGATACGC CGCTTCAGGC GGTCGATCTC
ACGGCGGATA CTCCCTGGAT CATCTGCTAC ACCGGCGGCA CAACGGGATT GCCAAAGGGC
GCGATCCTGA CGCACGGCAA TGTCTTCTTC AATGTGGTCA ACACCGTCGC CGGATGGGGG
TTGCGCCCCG ATGATGTGAC CATCCTCAAC GCGCCGTTAT TTCACACCGG CGGGCTGAAT
GTGTTCACAG CGCCACTGGC GCATATCGGC GGTATGTCGA TTGTATGCCG CCAATTCGAT
CCAGATCAGG TGTTCGATCT GATTGAACAG CAGGGCGTTA CCATCTATTT CGGCGTGCCG
ACGATGTTCC TGGCGCTCCA GCGCCATCCG CGCTGGGAGA CGGCAGATTT CTCACGAGTG
CGCTGGATGA TCAGCGGCGG CGCGCCATGC CCGCCGCCGG TCTTCGAGAC CTTCCGCCGC
CGGGGGGTGC CCTTCCGCAC CGGGTATGGG TTGACCGAAG CCGGACCGAA TACGTTCTGG
CTACCTGATG ATGACATCGA ACACAAGGCG GGGTCAGTCG GCTATCCGTT ACCGCATATC
GACCTGCGAT TGGTGAATGA GCGCGGCGAG CCGTGCGCAC CCGGAGAAGT CGGCGAGTTG
CAGATTCGTG GGGCGCACGT TTGCGCAGGT TACTGGCGGC GACCGGCGGA AACTGCGGCA
ACAATCGTCG ATGGCTGGTT GCGCACCGGC GACCTGGCGC GGCGTGACGA AGAGGGATGC
TACACCATCG TCGGACGCCT GAAGGATGTT ATCATTTCGG GTGGCGAAAA CATCTACCCG
GCTGAGGTGG AAGCAGTGAT TGCCGGGCAT CCGGCAGTGC TGGAAGTTGC GCTGATCGGC
GCACCGGATG CAACATGGGG CGAGGTAGGG TGGGCGGTCG TCGTACTGCA CGAGGCGTCT
CGACAGCAGA TAACCGACAT TGAGCGGCAG ATTCTCGACT ACTGCCGCGA CCGGTTGGCG
CGGTACAAAA TCCCGAAACG TGTCATCGTC GTGGATGCCC TGCCGCGCAC CGGTGCGGGC
AAAATCGATA AACGCGCATT GCGACGGGAG TTTGTCGTTG AAGGTTGA
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| Protein sequence | MYIGDWLARR ADLTPHRIAL LDAADNLRPI TFRLWHTNVS RTARFLAGRF GVQPGDRVAV
LAMNCVAYLD IWFACGKLGA ILQNLNWRLT PTELAGLIAD AEPALLIYGP DFVEQVRALR
SAGIVTPGIA LDADCRADPG DPVFAERDAY PDTPLQAVDL TADTPWIICY TGGTTGLPKG
AILTHGNVFF NVVNTVAGWG LRPDDVTILN APLFHTGGLN VFTAPLAHIG GMSIVCRQFD
PDQVFDLIEQ QGVTIYFGVP TMFLALQRHP RWETADFSRV RWMISGGAPC PPPVFETFRR
RGVPFRTGYG LTEAGPNTFW LPDDDIEHKA GSVGYPLPHI DLRLVNERGE PCAPGEVGEL
QIRGAHVCAG YWRRPAETAA TIVDGWLRTG DLARRDEEGC YTIVGRLKDV IISGGENIYP
AEVEAVIAGH PAVLEVALIG APDATWGEVG WAVVVLHEAS RQQITDIERQ ILDYCRDRLA
RYKIPKRVIV VDALPRTGAG KIDKRALRRE FVVEG
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