Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0413 |
Symbol | |
ID | 5537875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 522170 |
End bp | 522943 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640892575 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001430562 |
Protein GI | 156740433 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.732531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTCG TAATGGCCGG CGACCTGAAC GTTCACTACA TCGAGCGAGG CGCCGGTGAG CCGGTGATCC TGTTGCACGG CAACTGGGCG ACATGCGGAT GGTGGGAGCC GACGTTGAAC CTGTTGCCGG AGGGGTACCG AGGCATTGCT CCCGATATGC GCGGACGTGG AAAGACTGAG GGACCGGACC ACGACTACAG TCTGGCAGCG CTGGCGCAGG ATACGCTGAC GTTTGCCGAT GCGCTCGGTT TAGAGCGCTT TCACCTCGTG GGGCATTCGC TCGGTGCAGG AGTGGCGATG CAATTGGCGC TCGATCACGG AGATCGCGTC CTGTCGCTGG CGGCAGTTGC GCCACCGTGG GTCGATGGCA TGCCGGCGGA AGCCAATTCG CCGGAGCGCC AGCAGATGCT GAAGACAAAT TTCGACCTGT TTGCAATGGC GTTGAAGGCG CTGGCGCCAA CCGCACCCGA CGATGCCTTC TGGCATCGGC TCGTTGCCGA GGGGCATGAG CAGCGGATCG AAGCGGCGCT GGGAGCAATC AACACGCTGG CGCAGTGGGC GCCGGGAGAT GCGCTGCGCG CGATTACCTG TCCGAAACTG GTCATCGCCG GCGAAAACGA TATTCTGGTG ACGCAACCGG TGGCGAGCCG CGCCGCCGAG GCGCTCGGTG CACAGTTCAT GGTTATCCCC GGCGTCGGGC ATTCGCCGAA TATCGAAGCG CCTGCCGTGT TCGTCGAGTT GCTGACCGAC CTGTGGCGGA GCGGGAGACG GTAG
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Protein sequence | MPFVMAGDLN VHYIERGAGE PVILLHGNWA TCGWWEPTLN LLPEGYRGIA PDMRGRGKTE GPDHDYSLAA LAQDTLTFAD ALGLERFHLV GHSLGAGVAM QLALDHGDRV LSLAAVAPPW VDGMPAEANS PERQQMLKTN FDLFAMALKA LAPTAPDDAF WHRLVAEGHE QRIEAALGAI NTLAQWAPGD ALRAITCPKL VIAGENDILV TQPVASRAAE ALGAQFMVIP GVGHSPNIEA PAVFVELLTD LWRSGRR
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