Gene Rcas_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0413 
Symbol 
ID5537875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp522170 
End bp522943 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content64% 
IMG OID640892575 
Productalpha/beta hydrolase fold 
Protein accessionYP_001430562 
Protein GI156740433 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.732531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTCG TAATGGCCGG CGACCTGAAC GTTCACTACA TCGAGCGAGG CGCCGGTGAG 
CCGGTGATCC TGTTGCACGG CAACTGGGCG ACATGCGGAT GGTGGGAGCC GACGTTGAAC
CTGTTGCCGG AGGGGTACCG AGGCATTGCT CCCGATATGC GCGGACGTGG AAAGACTGAG
GGACCGGACC ACGACTACAG TCTGGCAGCG CTGGCGCAGG ATACGCTGAC GTTTGCCGAT
GCGCTCGGTT TAGAGCGCTT TCACCTCGTG GGGCATTCGC TCGGTGCAGG AGTGGCGATG
CAATTGGCGC TCGATCACGG AGATCGCGTC CTGTCGCTGG CGGCAGTTGC GCCACCGTGG
GTCGATGGCA TGCCGGCGGA AGCCAATTCG CCGGAGCGCC AGCAGATGCT GAAGACAAAT
TTCGACCTGT TTGCAATGGC GTTGAAGGCG CTGGCGCCAA CCGCACCCGA CGATGCCTTC
TGGCATCGGC TCGTTGCCGA GGGGCATGAG CAGCGGATCG AAGCGGCGCT GGGAGCAATC
AACACGCTGG CGCAGTGGGC GCCGGGAGAT GCGCTGCGCG CGATTACCTG TCCGAAACTG
GTCATCGCCG GCGAAAACGA TATTCTGGTG ACGCAACCGG TGGCGAGCCG CGCCGCCGAG
GCGCTCGGTG CACAGTTCAT GGTTATCCCC GGCGTCGGGC ATTCGCCGAA TATCGAAGCG
CCTGCCGTGT TCGTCGAGTT GCTGACCGAC CTGTGGCGGA GCGGGAGACG GTAG
 
Protein sequence
MPFVMAGDLN VHYIERGAGE PVILLHGNWA TCGWWEPTLN LLPEGYRGIA PDMRGRGKTE 
GPDHDYSLAA LAQDTLTFAD ALGLERFHLV GHSLGAGVAM QLALDHGDRV LSLAAVAPPW
VDGMPAEANS PERQQMLKTN FDLFAMALKA LAPTAPDDAF WHRLVAEGHE QRIEAALGAI
NTLAQWAPGD ALRAITCPKL VIAGENDILV TQPVASRAAE ALGAQFMVIP GVGHSPNIEA
PAVFVELLTD LWRSGRR