Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0407 |
Symbol | |
ID | 5537869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 514608 |
End bp | 516038 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640892570 |
Product | site-specific DNA-methyltransferase (cytosine-specific) |
Protein accession | YP_001430557 |
Protein GI | 156740428 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.144423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAATC CAGCCAAGGT TTCTGACATT TTGAAAGGCG AGCAGAATAT AGGCCTGAGT AAAATAGCCC ACTTGGATAA ACAGCTATTT CAACGTTTCA AAAGTAAATT CGCCGTTCAG CCCTCACTCT CTCGGCTTCT GGTCAGTTTT CAAGCGAACA AAACCAGGCC TGTTTATCGC TGGTACAAGT TCAAAGAAGC GTTCTCGGCT TCTTTAGTTG AGCATCTATT TCATAAGTAT GGCATTACCG CAGGCAGAAT CTTGGATCCT TTTGCGGGCA GTGGGACAGC TTTATTTGCC GCAAGTGCGA TGGGCATAGA TGCGGACGGT ATCGAACTAT TACCCATCGG TCACGAAATC ATTACGGCCA AGCGAATTCT GGATGCAGAA TTTACATCCG AAGATTTCGA GAGATTGCGC CGGTGGTCGG AGCTAAGAGT CTGGGAGCAA TCAGAAACGC GCGTTCCCTT GCCAGAGCTG CGAATCACAC AAGGAGCTTA TCCAGGAAAA ACAAAAGAAG CCATTGAGAA ATATATAGGC GCGTGCCAAC AAGAGAACAG CCGCGTCCAG GCTGTCTTGC GCTTTGCTTT ACTTTGCGTG TTAGAGTCTA TCAGTTTTAC TCGAAAGGAT GGTCAATACC TTCGGTGGGA CTATCGTTCT GGACGTACAC ACGGTAAGAA GATTTTCGAT AAGGGTGAAA TTCCAGAGTT CGGGCAAGCC ATCAGCGAAA AGCTAAACGA GATTTTAGAA GATGCATCGC CCGTTCACCA AACAACTCTG TTCCCTATTG AAAAACTCCA AGGCCAAATC TGTTTGTATG ATGGCTCATG TCTTCAAGTA TTGCCCCGAT TATCCGATAA TGCCTACGAT GCCATTATGA CCTCACCGCC TTACTGCAAC CGTTATGATT ATACGCGCAC GTATGCGCTG GAATTGGCGT TATTGGGCAC AGGTGAACAA GGACTATTAC GACTCCGCCA AGAGATGCTC AGTTGCACGG TGGAGAACCG TGCAAAAGAC CTGTTAAGTA TCAATCCGTT ATGGACAACG GCGCTGGCTG CCGCTGATGA GCAGGATCTG TTACAGGCCA TCCTGACCTA CTTGGAAGAC CAAAAAGCGC AAAGAGCCTT GAACAACAAT GGTATTCCCA GGATGGTCGG GGGCTATTTC TATGAAATGG CTTGCGTTAT TGCAGAATGT GCGCGTGTTC TAAAGCCGAA CGCTCCCTTG TTTATGGTCA ATGATAATGT CCGTTATGCA GGAGCGAGCA TTTCCGTAGA TATGATTCTC TCTGATATTG CAGAGAAATT AGGCTTTCAA GTTGACCATA TCCTCGTTTT GCCAAACGGC AAGGGAAATA GTAGCCAGCA GATGGGGGAA CATGGACGCG AACCCCTGCG CAAGTGTATT TACGTCTGGA GAAAATCGTG A
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Protein sequence | MLNPAKVSDI LKGEQNIGLS KIAHLDKQLF QRFKSKFAVQ PSLSRLLVSF QANKTRPVYR WYKFKEAFSA SLVEHLFHKY GITAGRILDP FAGSGTALFA ASAMGIDADG IELLPIGHEI ITAKRILDAE FTSEDFERLR RWSELRVWEQ SETRVPLPEL RITQGAYPGK TKEAIEKYIG ACQQENSRVQ AVLRFALLCV LESISFTRKD GQYLRWDYRS GRTHGKKIFD KGEIPEFGQA ISEKLNEILE DASPVHQTTL FPIEKLQGQI CLYDGSCLQV LPRLSDNAYD AIMTSPPYCN RYDYTRTYAL ELALLGTGEQ GLLRLRQEML SCTVENRAKD LLSINPLWTT ALAAADEQDL LQAILTYLED QKAQRALNNN GIPRMVGGYF YEMACVIAEC ARVLKPNAPL FMVNDNVRYA GASISVDMIL SDIAEKLGFQ VDHILVLPNG KGNSSQQMGE HGREPLRKCI YVWRKS
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