Gene Rcas_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0406 
Symbol 
ID5537868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp514076 
End bp514546 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content56% 
IMG OID640892569 
Producthypothetical protein 
Protein accessionYP_001430556 
Protein GI156740427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.110236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCAG TTTTGAGTCG GGTCTTGTCG GCGGGTCGGT TGGCAAGGTC AAGGTTTCGT 
CAGGCAAGGT TTTTTTGTCG GTCAAGCGCG TTGCAAAGAG TCTTTTTGGT CAGGTTTGGT
TTGGGCTTTG CTTCGGCAAC GGCGCTTCCC CATTTCAGGA AATTGGTCAG TTTGGGGTGT
TGCCAAAGAG CAAGTCTGTT GTACAATGTG GTCAAGGCAG TTGTGGTTCT GTCTTTGGTC
AAGGTGTCTG GCGCAACCCG AAAACGCCCA ACACCGTTTG CAGCGGACAC ATTCGCTGCG
CTCAGTGCAG GCAGCGGCTA CGCCGCTGAA GGTACGCGCC GCGAGCCAGT GGAGTTGAGT
TTAGGCGAAG GAGTCTTGCC CGTCCCGCCG CTGCCGCTGA AACCAACCGT TAGGCAGCCT
CTTCGGAATC CAGGCAGCCG GGAAAACTCG GGTCTCGGGG TGAGCAATTA G
 
Protein sequence
MLAVLSRVLS AGRLARSRFR QARFFCRSSA LQRVFLVRFG LGFASATALP HFRKLVSLGC 
CQRASLLYNV VKAVVVLSLV KVSGATRKRP TPFAADTFAA LSAGSGYAAE GTRREPVELS
LGEGVLPVPP LPLKPTVRQP LRNPGSRENS GLGVSN