Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0402 |
Symbol | |
ID | 5537864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 509931 |
End bp | 510737 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640892565 |
Product | hypothetical protein |
Protein accession | YP_001430552 |
Protein GI | 156740423 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00484217 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00235122 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGAAGA TTTTTGTATG GATGATCCTT GTAGTGGCGC TTAGCGCCTG TGGGGCGCCT GCAAATTCAA CGCCCGACTC GGCGCCTGCA AATTCAACGC CCGACTCGGC GCCTGCAAAT TCAACGCCCG ACTCGGCTCC AATCAAACCC ACGCCCACTG AGCCGTTCAG CGGAGTGATC AATGAGTTCG AATCCACACA GACGCCGATC GCCAACCCCA CCCCCGAAGG GGACAGCAAC GAATGCGACA ATCCCTTCTA CCCCGTTGCG GACGAAGCCA CCTGGTTTTT CAGCATTTCC ACAGGCGAGA ACGCCATCCA TACCATGTCT GTGGATGACT TTGGCAAATT CACCATCACG GTGAAAGGCG CAAACAGCAC GTTTACCATT GACGGTCAGT GCAACAGTGA GGGGGTCACC ATCATGAACG TCCCAGGCGC ACAGACCACC TATTCGGGCG AATACGGCAG TTCAGCCGTT ACCACGGTCA GCGTCAGCGG CGTGAGCCTG CCCAATAACA TTGCTCCAGG TCAGCAGTGG ACGCAGACCA TCACGGTTAC CACGGAGTCG GGCACTTCGA TTATTGAGAC CAACTACACG GCGGTTGGAT TTGAAAACGT CACCGTGCCG GCGGGAGAGT TCTACGCACT GAAAATCGAA CAGGATGGGT ATGTGACAGT CTTTGGGCAG AAGGTGGCAA TGCACGGCTT CAACTGGTAT GCCGAGGGCG TCGGTCCGGT CAAAGGCGCG ATGGACGGCG CGCCGGTCCT TGAATTGATG ATGTATGACA TTCCCGATAA GAAATGA
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Protein sequence | MKKIFVWMIL VVALSACGAP ANSTPDSAPA NSTPDSAPAN STPDSAPIKP TPTEPFSGVI NEFESTQTPI ANPTPEGDSN ECDNPFYPVA DEATWFFSIS TGENAIHTMS VDDFGKFTIT VKGANSTFTI DGQCNSEGVT IMNVPGAQTT YSGEYGSSAV TTVSVSGVSL PNNIAPGQQW TQTITVTTES GTSIIETNYT AVGFENVTVP AGEFYALKIE QDGYVTVFGQ KVAMHGFNWY AEGVGPVKGA MDGAPVLELM MYDIPDKK
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