Gene Rcas_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0400 
Symbol 
ID5537862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp508895 
End bp509221 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content54% 
IMG OID640892563 
Producthypothetical protein 
Protein accessionYP_001430550 
Protein GI156740421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00477957 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00198769 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGAGTCGGG TCTTGTCGGC GGGTCGGTTG GCATCAGGCA AGTTTTTTTT GTCGGTCAAG 
CAGTCTTGCA AAGAGTCTTG TTTTGTCAGG TTTGGTTTGG GCTTTGCTTC GGCAACGGCG
CTTCCCCATT TCAGGAAATT GGTCAGTTTG GGGTGTTGCC AAAGAGCAAG TCTGTTGTAC
AATGTGGTCA AGGCAGTTGT GGTTCTGTCT TTGGTCAAGG TGTCTGGCGC AACCCGAAAA
CGCCTAACAC CGTTTGCAGG CGGACACATT CGCTGCGCTC AGTGCAGGCA GCAGCTTCGC
CGCTCCAGAG TCCGCGCCGC GAGCTAG
 
Protein sequence
MSRVLSAGRL ASGKFFLSVK QSCKESCFVR FGLGFASATA LPHFRKLVSL GCCQRASLLY 
NVVKAVVVLS LVKVSGATRK RLTPFAGGHI RCAQCRQQLR RSRVRAAS