Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0400 |
Symbol | |
ID | 5537862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 508895 |
End bp | 509221 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640892563 |
Product | hypothetical protein |
Protein accession | YP_001430550 |
Protein GI | 156740421 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00477957 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00198769 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGAGTCGGG TCTTGTCGGC GGGTCGGTTG GCATCAGGCA AGTTTTTTTT GTCGGTCAAG CAGTCTTGCA AAGAGTCTTG TTTTGTCAGG TTTGGTTTGG GCTTTGCTTC GGCAACGGCG CTTCCCCATT TCAGGAAATT GGTCAGTTTG GGGTGTTGCC AAAGAGCAAG TCTGTTGTAC AATGTGGTCA AGGCAGTTGT GGTTCTGTCT TTGGTCAAGG TGTCTGGCGC AACCCGAAAA CGCCTAACAC CGTTTGCAGG CGGACACATT CGCTGCGCTC AGTGCAGGCA GCAGCTTCGC CGCTCCAGAG TCCGCGCCGC GAGCTAG
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Protein sequence | MSRVLSAGRL ASGKFFLSVK QSCKESCFVR FGLGFASATA LPHFRKLVSL GCCQRASLLY NVVKAVVVLS LVKVSGATRK RLTPFAGGHI RCAQCRQQLR RSRVRAAS
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