| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0387 |
|---|
| Symbol | |
|---|
| ID | 5537849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 487058 |
|---|
| End bp | 487816 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640892550 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001430537 |
|---|
| Protein GI | 156740408 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.231232 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG CAGAAGAAAC TGCCGAGACC TACGACCCAT CACGCTATGA ACGCCCGTCC
GTTACCGTCG ATGTGGTCAT CTTCACGCTG ATCGACCGCG AACTCCACGT GCTGCTGGTG
CGCCGCAAGC GCTGGCCCTA CGAAGGATAT TGGGCGATCC CCGGCGGCTT TGTGCAGATG
CACGAGTCGC TCGAAGATGC AGCGCGCCGC GAACTCGAAG AGGAAACCGG CGTGCGCGAC
ATTTATATCG AGCAGTTGTA CACCTTTGGC GACCCGAACC GCGACCCGCG CACCCGTGTG
ATCAGCGTCG CCTATTTTGC GCTGGTCCGC GCCGACCGGC AGCGTCTGCG CGTGTCGGAA
GAGAGCATCG ATGTGCGCTG GTTTCCGGTG CGCGCGGCGC CATCGCCGCT TGCCTTCGAC
CACGACCGCA TCCTGGCGAT GGCGCTTGTG CGCCTGCGCT CAAAACTGGA GTACACGACG
CTCGCATTCG AGCTGCTGCC AGAGGTCTTT TCAATCCTGG AATTGAAACA TATTTACGAA
CAGATTTTCG GCGAAAAACT GGACAAAGGC AATTTCTATC GTAAAATAAA GGACGCTGGC
GTGCTGGAGG AGACCGGTCT GTTGCGCGAA GGGCGCGGTC GTCCGACCCG ACTCTACCGT
TTCCGCCGTG ATCGTGGCGA TGGGCAGTTC GTCTTCCGCT GGCGCGAAGC GCGTATTGAT
GCCGGCGAGT CACACGAACG CGATCTCTCG TCTTCGTAA
|
|---|
| Protein sequence | MTDAEETAET YDPSRYERPS VTVDVVIFTL IDRELHVLLV RRKRWPYEGY WAIPGGFVQM
HESLEDAARR ELEEETGVRD IYIEQLYTFG DPNRDPRTRV ISVAYFALVR ADRQRLRVSE
ESIDVRWFPV RAAPSPLAFD HDRILAMALV RLRSKLEYTT LAFELLPEVF SILELKHIYE
QIFGEKLDKG NFYRKIKDAG VLEETGLLRE GRGRPTRLYR FRRDRGDGQF VFRWREARID
AGESHERDLS SS
|
|---|
| |