| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0380 |
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| Symbol | |
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| ID | 5537842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 477613 |
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| End bp | 478317 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892543 |
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| Product | ribonuclease III |
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| Protein accession | YP_001430530 |
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| Protein GI | 156740401 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.492905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC CGCTTGATGA ACTTTGTGCG CGTCTTGACG TAACGTTTTC CGATCAGCGT
CTGCTCTGGC AAGCGCTGAC GCATCGCTCG TTTCTCAATG AGCGTGTCGA TGAGCGCCTC
TCGCTGTTCA GCAACGAGCG CCTGGAGTTT CTGGGAGATG CGATTGTCAA TTTTCTGGCG
ACGACGCTGG TGTTCGAGCG TTTTCCCGAT GCTGGCGAAG GGTATCTGAC TGCCTGGCGC
GCGGCGCTGA TACGAACGGA GACGCTCGCC AGTTTTGCGC GGCGGTACGA CCTTGGCTCC
CATACGCTGC TGGCGCGTGG CGAAGAGTCG AGTGGCGCCC GGCAACGACC ATCGCTGCTG
GCGGATACGT TTGAGGCGGT AGTTGCGGCA ATCTTCATCG ATCAGGGTCT TGATGCAGTG
CGAAAGTTTC TCCTGCCGCT CTTCGAGGAA ACGCTGGCGA CGTTGCAGGA ACAGGGGCTG
CCGGTGGACT ATAAGAGCAA ACTGCAAGCG CGTATTCAGG CAGAACGGGG GATCACGCCG
CGCTATCGGA TGATCGAGCG AAGCGGTCCG GAGCATCAAC CGGAGTTTAC ATTCGAAGCA
CTGGCAGGCG ATGAGTCACT CGGAACAGGA CGCGGTGCGA GTAAACAGGC GGCAGAACAG
GACGCGGCGC GAGACGCGCT CGACAGGTTG GGGGGGAGGG ATTAG
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| Protein sequence | MKKPLDELCA RLDVTFSDQR LLWQALTHRS FLNERVDERL SLFSNERLEF LGDAIVNFLA
TTLVFERFPD AGEGYLTAWR AALIRTETLA SFARRYDLGS HTLLARGEES SGARQRPSLL
ADTFEAVVAA IFIDQGLDAV RKFLLPLFEE TLATLQEQGL PVDYKSKLQA RIQAERGITP
RYRMIERSGP EHQPEFTFEA LAGDESLGTG RGASKQAAEQ DAARDALDRL GGRD
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