| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0372 |
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| Symbol | |
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| ID | 5537834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 464118 |
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| End bp | 466865 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640892535 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001430522 |
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| Protein GI | 156740393 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGT CGACTGTACA ATCGGATATC AAACCGCAGA CGTCCCCCCT AACGCACGGA
GATGCGGCGC CGGAGAACTC CTGGCATGCG TACCCTATCG ATGAAGTTTT TGCTCTGCTC
GATAGCAAAC CGGACGGATT GAGCAGCGAC GAGTCCCGGA AGCGTCTGGA GCAGTATGGT
CCGAATGAAC TTCAGGCGGC GCGGCGCATC TCGCCTTGGG AGATTCTGCT CGAACAGTTC
AAGAATGTTC TGATCATCAT TCTGCTGATT GCGACGGCGA TTTCGTTCTT TTTGGGTCAT
GGCGTCGAGT CGATTGTCAT TGCCATTATC GTTCTCTTTG CCGTGCTTCT GGGGTTTATC
CAGGAATACC GCGCTGAGCG CGCCATCGAG GCGTTGCAGC AAATGGCGGC GCCCACTGCC
ACTGTGTTGC GCGATGGAAA AGAGATGCGC ATTCCTGCGC GCGATCTGGT TCCCGGCGAT
GTCATTCTTC TGCACACCGG CGATCGAGTG CCGGCGGATG CGCGTTTGAT CGAGGCGATT
AATTTGCAAA TCGAGGAAGC CGCACTGACC GGCGAGTCGG TTCCGGTCGA GAAGCATATC
GATCCGCTGG GGCGCGATAA CCTGCCGCTC GGAGACCGCA GGAATATGGC ATATGCCGGC
ACGTCGGTGA CGTATGGACG TGGGAAGGCG CTGATCGTCG CCACCGGCAT GCGCACCGAG
TTTGGCAAAA TTGCGCAGAT GCTCCAGACG GTCGAGACGG TGCGCACACC GCTTCAGCAG
AACCTGGATC GGGTCGGCGG AGTGCTGGCG CGCGCGGCGT TTGTGGTTGT GGCGCTCATC
GTGGCGCTTG GGTTGCTGCG CGGGCAACCG ATCATCGATA TGCTGATCTT TGGTATCGCG
CTGGCAGTGG CAGTCGTACC GGAAGCGCTT CCAGCCGTTG TCACGATTTC GCTGGCGATT
GGCGTGCAGA AAATGGCGAA ACGCCATGCC CTCATCCGTC GTCTGCCGGC GGTTGAAACG
CTGGGCAGCA CCTCGGTGAT CTGCACCGAT AAAACCGGCA CGTTGACCAA AGATGAGATG
ACCGTTCGCC AGATCGTTAC GGGCGAACAA TGTTTTACCG TCTCAGGCGC CGGGTACGCG
CCCGAAGGCG AGTTCCTTCT CGATGATCAT CCGGTTTCGC CGCCGGAGCC GCTCGCGCTC
ACCCTGACGG CTGCGGTTCT CGCGTCTGAT GCGCGCCTGA TCCGGAAAGA AGATGGCGGT
TGGGACATCA AAGGTGATCC GACGGAAGGC GCGCTCATCG TCGCGGCTGC CAAAGCGGGC
TTATGGAAGG AGACCCTCGA CGCTGCGAAT CCACGCATCC ACGAAATCCC GTTTTCGTCC
GAAACCAAGC GCATGACGAC GCTCCACCGG GGAGCGGATG GCGTGACCGC GTATGCAAAA
GGAGCGCCGG AAGTCATTCT GGAAGGGTGC GTTTCTGTCA TGACCGCCGA TGGCATGCAC
CTGCTAGACG ATGCCAGGCG TGAGCAGATT CTGCGTCAGG CGCAGGAGAT GGCGAGCCAG
GCGATGCGGG TGCTGGGTAT TGCGTTCAAA CCGGGCGCCA CGCCGGATGA TGCAGAAACC
GGTATGACCT TCCTGGGTCT TGTGGGCATG ATCGATCCGC CCCGTCCAGA AGCGAAAGGC
GCGATTGCCA CCTGTATCGA AGCCGGCATC CGGCCGGTCA TGATCACCGG CGATCATCCA
TTGACAGCGC AGGCGATTGC GCGGGAGTTG CGCCTGCTTG ATGGCGGGCG CGTTGTGACC
GGCGCTGAAC TAGAAGCCAT GTCGGATGAG CGGTTGAAGC GTGAGGTGCA AAATATCAGC
GTCTATGCGC GCGTCTCACC GTCGCACAAA CTGCGGGTGG TGACTGCATG GCAGTCGAAC
GGGCATGTGG TCGCTATGAC CGGTGATGGC GTCAACGATG CGCCGGCGCT CAAGCGAGCC
GATATCGGTG TAGCGATGGG CGTCACCGGC ACCGATGTGA CCAAAGAAGC CGCAGCGATG
ACCCTCACCG ACGATAACTT TGCCTCGATC GTGGCAGCCG TGGAAGAGGG GCGCGGCGTC
TTCAGTAACA TCAAGAAATA CCTGATGTAT CTGCTCTCGT CCAATATCGG CGAAATCGGA
CTGATGGCAG GCGCTTCGTT CCTTGGACTG CCGTTGCCGC TTTCGGCGGT GCAGATCCTA
TACGTCAACC TGGCGACCGA TGGGTTGCCC GCGTTGGCGT TGGCAGTCGA TCCGCCAGAA
GCCGACCTCA TGAAGCGCAA GCCGCGCAAT CCCCGCACTG GCATCTTTAC CCGCCCGGTC
GTCACATTGA TGGTGCTTGG CGGCGTCTGG TCGGCGATTA TCAACCTGGC GCTCTTCGCA
TGGGCGCTGA ATTCGGGGCG CGGATTGGAA CAGGCGATGA CCATGACGTT TGTCTCGCTG
GTGTTGATCC AGTTCTTCAA AGCCTACAAC TTTCGATCTG ATCGGAATTC GGTGTGGAAG
AAGCCGTTTG CCAACAAGTG GCTCAATCTG GCAATTATCT GGGAGTTGGC GCTGCTCTCG
CTGATCGTGT ATCTGCCGTT TCTGCACGAT GCCTTTGGAA CGTATGCACT GCCGTTGACC
GACTGGTTGA TCGTTGCCGG GCTGGCCGTG ACCGTCGTGC CGGTACTGGA ACTTGCCAAG
TGGATGGTGC GCAAGGGATG GTTTGGACTC ATTGATCCTG ACGAGTGA
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| Protein sequence | MKSSTVQSDI KPQTSPLTHG DAAPENSWHA YPIDEVFALL DSKPDGLSSD ESRKRLEQYG
PNELQAARRI SPWEILLEQF KNVLIIILLI ATAISFFLGH GVESIVIAII VLFAVLLGFI
QEYRAERAIE ALQQMAAPTA TVLRDGKEMR IPARDLVPGD VILLHTGDRV PADARLIEAI
NLQIEEAALT GESVPVEKHI DPLGRDNLPL GDRRNMAYAG TSVTYGRGKA LIVATGMRTE
FGKIAQMLQT VETVRTPLQQ NLDRVGGVLA RAAFVVVALI VALGLLRGQP IIDMLIFGIA
LAVAVVPEAL PAVVTISLAI GVQKMAKRHA LIRRLPAVET LGSTSVICTD KTGTLTKDEM
TVRQIVTGEQ CFTVSGAGYA PEGEFLLDDH PVSPPEPLAL TLTAAVLASD ARLIRKEDGG
WDIKGDPTEG ALIVAAAKAG LWKETLDAAN PRIHEIPFSS ETKRMTTLHR GADGVTAYAK
GAPEVILEGC VSVMTADGMH LLDDARREQI LRQAQEMASQ AMRVLGIAFK PGATPDDAET
GMTFLGLVGM IDPPRPEAKG AIATCIEAGI RPVMITGDHP LTAQAIAREL RLLDGGRVVT
GAELEAMSDE RLKREVQNIS VYARVSPSHK LRVVTAWQSN GHVVAMTGDG VNDAPALKRA
DIGVAMGVTG TDVTKEAAAM TLTDDNFASI VAAVEEGRGV FSNIKKYLMY LLSSNIGEIG
LMAGASFLGL PLPLSAVQIL YVNLATDGLP ALALAVDPPE ADLMKRKPRN PRTGIFTRPV
VTLMVLGGVW SAIINLALFA WALNSGRGLE QAMTMTFVSL VLIQFFKAYN FRSDRNSVWK
KPFANKWLNL AIIWELALLS LIVYLPFLHD AFGTYALPLT DWLIVAGLAV TVVPVLELAK
WMVRKGWFGL IDPDE
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