| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0367 |
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| Symbol | |
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| ID | 5537829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 456114 |
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| End bp | 458837 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892530 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001430517 |
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| Protein GI | 156740388 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.159173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.186689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGT CCGATAGTCA GCGACCGACT GAAATGGCGA AAGCCTACGA ATCGCAGCGC
GTCGAGCAGC GCCTCTACGA ATGGTGGGAG CGCAGCGGCT TTTTCACGCC ACCCGAAACA
TCGGACCGTC CGCCGTTTGT TGTCTCGATG CCTCCGCCCA ACGTAACCGG CGAACTCCAC
ATGGGGCATG CCATGTTCGT CACGATTGAG GATGTGATGG TGCGCTGGCA TCGGATGCTC
GGCGAACCGA CACTCTGGCT GCCCGGTACC GACCACGCTG GCATCGCCAC ACAATTGCAG
GTCGAACGGT TGCTCCAGAG TGAGGGCTTG AGTCGCCAGC AGGTCGGTCG TGAGGAGTTT
TTACGCCGCA CGTGGGAATG GAAAGAAAAG TATGGCGGCG AAATCACCCG TCAGCTACGC
CGTCTCGGTG CGTCGTGCGA TTGGACGCGC GAACGGTTTA CGCTCGACCC GATGCTCTCG
CGCGCGGTAC GCGCCGCCTT CAAGCGCCTG TACGATGATG GCCTGATCTA CCGTGGCTAT
CGTCTGGTCA ACTGGTCGCC AAACCTGCAA ACGGCAGTGA GCGACCTGGA GGTGGAGTAC
GAAGAGCGCG ATATGTATCT GTACCATGTG CGCTACCCGA TCGTCGGCGA CAGTTGGCGC
CCCGGCGTCT GGGGCAGTGG TCGGTGGGCT GCCGGCGCAA CGGAGTTTAT CACGGTTGCA
ACCACGCGCC CGGAAACAAT CATGGGCGAT ACCGCCGTGG CAGTGAACCC CAACGATCCG
CGCTACCGGC ACATGATCGG TCAGATGGTT GCGCTGCCGG CGATTGGTCG CCTGATCCCG
ATTATCGCCG ACGACTACGC CGACCCGGAG TTTGGCACCG GTGCGGTGAA AATTACACCA
GCGCACGACC CGAACGACTA TCTGGTTGGT CTGCGTCACC ATTTGCCGAT GATCAACATT
ATGAACGCCG ATGCGACCCT CAATGCCGAA GCCGGTCCGT ATGCCGGTCT GGATCGCTTC
GAGGCGCGGC GGCGACTAAT TGATGACCTT GAGCGCGAAG GGTTGCTGGT CGAGGTGCGT
CCGCACCGCA TGTCGGTGGG GATCAGTCAA CGCGGCGGCG AGATCGTTGA GCCGCTTCTG
AGCGAGCAGT GGTTCGTGCG CGCCGGGCCG CTCGCCGAGT TGGCGCTTGC GGCGGTGCGC
GAGGGGCGTA CCCGCATCGT GCCGGAACGC TTCGAGAAGG TATTCTTCCA CTGGCTGGAA
AATATTCAGG ATTGGTGCAT CAGCCGCCAA CTCTGGTGGG GGCACCGTAT TCCTGTGTGG
TACACGCCCG ACGGTCAAAT GATCGTGCCC GGTCCCGACG ATCCTGATCC GCAAGGGCAG
GGGCTGGTCC AGGACCCGGA TGTGCTCGAT ACCTGGTTTT CCAGCGCGCT CTGGCCCTTC
TCGACGCTTG GCTGGCCCGA CGATACGCCG GATATGCGGC GCTTTTATCC CACCAGCGTG
ATGGAGACCG GGTACGACAT TCTGTTCTTC TGGGTCGCGC GGATGATGAT GATGGGGTGC
TATCTGACAG GCGAACCCCC CTTCCATACC GTCTACCTCC ATGGTCTGGT GCGCGACAAA
GATGGACGCA AGATGTCGAA GACCTACGGC AATGTGGTCA ATCCGCTTGA TGTGATCGAC
CAGTATGGCG CTGACGCGCT GCGCTTCACG CTGGCGACCA GCAGTTCGCC CGGGCAGGAC
CTGAACCTCA ACCCGGAACG TATCGAGTCG GCGCGCAATT TCGCAAATAA ATTGTGGAAC
ATGACCCGCT TCGTCCTCTC GAAATTGGAC GATGACAGCC TGCGAGAAGC ACGGCGCGAT
CCCCAACCCG CGACGCTCGC CGACCGCTGG ATCCTGTCGC GCTACCATCG TCTGGCGTTG
GATGTTGATC GCCTGATGCG CGCGTACAAT TTTGGTGAGG CGGGGCGCAG CATTCAGGAG
TTCCTCTGGA GCGAATTCGC CGACTGGTAT GTCGAAGTCG CCAAGGTGCA GTTTGAGCAG
GAGTCGCTCA GACCATCAAC GCGCGTTATG CTCTTCACGG TGCTGGAAGG CGCGTTGCGC
ATGCTGCACC CCTTCATGCC ATTCGTTACG GAGGAAGCCT GGCAGTACCT GGTGCATGAT
CGCCGGTCTG ACGACATGCC GGCGTCGATC ATGATCGCGG CGTATCCACA ACCGGATACA
AACCGGATCG ACGAGAGCGT CGAGCGTGAT TGGGCGCTCG TTCAGGCGCT AATCACCGGT
ATTCGGAATA TTCGCACCGA ATACAAGGTC GAACCGGCGC GCCTGATCGC CGCCACTGTC
GTGGCAGGCA CGCAGGCGGC GCTGATCGAG TCGCAGCGCG CGATTATTGC GCGTCTGGCG
CGCGTCGAAG CGGATCGTCT GATGATCGCC GCCACCATCG ATCAGCGTCC GGCGAATGCC
GCCACCCTTG TGATCGGATC GGTTGAAGCA TACCTGCCGC TTGCCGGTAT GATCGATCTG
GAAGCCGAAC GCGCGCGCCT GCTCAAGGAA CTGGAATCGG CGCTGGCGGA AGCAGCGCGG
CGCGAGGCGC GGCTGGCCAC TCCTGGTTTC GTTGACAAGG CGCCTGCGGC TGTGGTGCAA
CGCGAACGCG ACGGCCTGGC GGCTGTGCGC GAAACGATAG CCCGCCTGCA GGATCGCCTG
GCGCAGCAAG GATTGCATCC ATGA
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| Protein sequence | MSTSDSQRPT EMAKAYESQR VEQRLYEWWE RSGFFTPPET SDRPPFVVSM PPPNVTGELH
MGHAMFVTIE DVMVRWHRML GEPTLWLPGT DHAGIATQLQ VERLLQSEGL SRQQVGREEF
LRRTWEWKEK YGGEITRQLR RLGASCDWTR ERFTLDPMLS RAVRAAFKRL YDDGLIYRGY
RLVNWSPNLQ TAVSDLEVEY EERDMYLYHV RYPIVGDSWR PGVWGSGRWA AGATEFITVA
TTRPETIMGD TAVAVNPNDP RYRHMIGQMV ALPAIGRLIP IIADDYADPE FGTGAVKITP
AHDPNDYLVG LRHHLPMINI MNADATLNAE AGPYAGLDRF EARRRLIDDL EREGLLVEVR
PHRMSVGISQ RGGEIVEPLL SEQWFVRAGP LAELALAAVR EGRTRIVPER FEKVFFHWLE
NIQDWCISRQ LWWGHRIPVW YTPDGQMIVP GPDDPDPQGQ GLVQDPDVLD TWFSSALWPF
STLGWPDDTP DMRRFYPTSV METGYDILFF WVARMMMMGC YLTGEPPFHT VYLHGLVRDK
DGRKMSKTYG NVVNPLDVID QYGADALRFT LATSSSPGQD LNLNPERIES ARNFANKLWN
MTRFVLSKLD DDSLREARRD PQPATLADRW ILSRYHRLAL DVDRLMRAYN FGEAGRSIQE
FLWSEFADWY VEVAKVQFEQ ESLRPSTRVM LFTVLEGALR MLHPFMPFVT EEAWQYLVHD
RRSDDMPASI MIAAYPQPDT NRIDESVERD WALVQALITG IRNIRTEYKV EPARLIAATV
VAGTQAALIE SQRAIIARLA RVEADRLMIA ATIDQRPANA ATLVIGSVEA YLPLAGMIDL
EAERARLLKE LESALAEAAR REARLATPGF VDKAPAAVVQ RERDGLAAVR ETIARLQDRL
AQQGLHP
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