Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0349 |
Symbol | |
ID | 5537811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 430457 |
End bp | 432244 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640892512 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_001430499 |
Protein GI | 156740370 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.129605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGTCA AACCAGAAAC CGATCCCTAC TACCGCCTGC GTCATTCCGC TGCGCATGTG ATGGCGCAGG CCGTGCTGGA ACTGTTCCCG GAAGGGAAAA TTGCGATTGG TCCGCCAATC GAAGATGGGT TCTACTACGA TTTCGATCTG CCGCGTCCGT TGACGCCTGA TGACCTGGAA GAGATCGAAA AGCGTATGCG CCGGATTATC GCCGGAAAGC ACCCGTTCGT CTACCGGGTC GTCGATCCCG ATGAGGCGCG CGCGCTGTTC CGCGACCAAC CATACAAACT GGAGTTGATC GACGGACTGC TCCACGGTCA GGACGAATAC GGCGAACAAG GAAGCACAAA CACGGTCATT TCGACGTACA GGCACGATAC GTTCGAGGAT CTCTGCCGTG GTCCGCATCT GGAACACACC GGACAGATCC CGCCGGATGC CTTCAAGTTG ATGAGCGTGG CCGGAGCGTA CTGGCGCGGC GACTCGAACC GTCCAATGCT CCAGCGGATC TACGGTACCG CGTGGAACAG CAAAGAGGAA CTCGACGCCT ATCTTCACCG TCTCGAAGAA GCAAAACGCC GCGATCACCG TCGGATCGGG AAAGAACTTG GCCTGTTCTA CTTTTCCGAG GATATTGGTC CCGGTCTGCC GCTCTTCACG CCAAAGGGGG AAATGCTGCG CCATCTGATG GAGTCGTATG TGCGCGAGGT TCAGACGCGC TATGGGTATC AGCATGTCTG GACCGGGCAT ATCGTCAAAG AGACGCTGTA CAAGAAGTCC GGGCACTATG AGGCGTACCG CGAGAACATG TTTCCTCCCA TGATCGAGGA TGAGGAGCAC GTCTACCGCC TGAAGCCGAT GAACTGCCCC AGCCATATGA CCCTCTACAA GGAGATGGGG ATTCACTCGT ACCGCGATCT GCCGTTGCGC TTTGCGGAGT TTGCAACGCT CTATCGCTAC GAGGAACGCG GCACGCTCAC CGGTTTGACG CGGGTGCGGG CGCTGACGCA GGACGACTGT CATATTTTCT GCCGTCCTGA TCAGATCGAA GAGGAGTTCG GGCTGGCGCT GCGTCTCATT CGTGAGGTGC TCGAAACATA CCGCTTCACC AATTACCGGG TGCGTCTCTC GCTGCGCGGC GAAGGCGGAA AGTATATCGC GGACGACGAG GCGTGGGATT TGGCGGAGCG TGCGCTGCGC ACCGCGCTCG ATCACTACAG TGTGCAGTAC GAGGAGGCGC CCGGCGAAGC GGCAATCTAT GGACCGAAAG CCGATTTTCT GGCACATGAT GTTCTGGGGC GCGAATGGCA GTTGTCGACC ATCCAGGTCG ATTTCATTCA GCCGCGTCGT CTGGGTCTGG AGTATATTGC GGAAGATGGT CAACCGCGCA CGCCGGTTGT GTTGCACCGT GCTGTCACCG GCACCACCGA GCGGTTCATG GGGGTGTTGA TCGAGCACTT CGCTGGCGCG TTTCCGCTCT GGTTGGCGCC GGTTCAGGCA GTGGTCATTC CGATCTCCGA CGAGCGACAC GGCGCCTATG CCGCCGACGT GGGGCGGCAA CTGACCGCAG CCGGATTGCG GGTCGAGGTT GATCTGAGCA GGGAGCGCAT GCAGGCAAAG ATTCGTCAGG CGCAGTTGCA GAAGATACCG TATATGCTTA TAATCGGCGA TAGAGAGCAG CATGCCGGCG CCGTCGCCGT GCGCTGCCGG TCGGGTGAAG ACCTCGGCGC AGTGCCGGTT GCGGCGTTCA TTGCGCGCGC CCGCGCTGAG ATTGAAGCAA AGGCATAA
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Protein sequence | MPVKPETDPY YRLRHSAAHV MAQAVLELFP EGKIAIGPPI EDGFYYDFDL PRPLTPDDLE EIEKRMRRII AGKHPFVYRV VDPDEARALF RDQPYKLELI DGLLHGQDEY GEQGSTNTVI STYRHDTFED LCRGPHLEHT GQIPPDAFKL MSVAGAYWRG DSNRPMLQRI YGTAWNSKEE LDAYLHRLEE AKRRDHRRIG KELGLFYFSE DIGPGLPLFT PKGEMLRHLM ESYVREVQTR YGYQHVWTGH IVKETLYKKS GHYEAYRENM FPPMIEDEEH VYRLKPMNCP SHMTLYKEMG IHSYRDLPLR FAEFATLYRY EERGTLTGLT RVRALTQDDC HIFCRPDQIE EEFGLALRLI REVLETYRFT NYRVRLSLRG EGGKYIADDE AWDLAERALR TALDHYSVQY EEAPGEAAIY GPKADFLAHD VLGREWQLST IQVDFIQPRR LGLEYIAEDG QPRTPVVLHR AVTGTTERFM GVLIEHFAGA FPLWLAPVQA VVIPISDERH GAYAADVGRQ LTAAGLRVEV DLSRERMQAK IRQAQLQKIP YMLIIGDREQ HAGAVAVRCR SGEDLGAVPV AAFIARARAE IEAKA
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