| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0346 |
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| Symbol | |
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| ID | 5537808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 428132 |
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| End bp | 428857 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640892509 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430496 |
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| Protein GI | 156740367 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.492905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCTCC GAACCGCCAT CCGAACTGTG CATAGCGACC CGCTCTGGTG GCGCAAAATC
CTGATCGGCG GCGCGTTATT CATGTCGGTC GTCGGTGCGC CGTTTGCCGG CGGATGGATT
ATTGAGTATA TCGACAACTC GCGGAAAGGG TATCCTGCGC CGCTTCCTCC GTGGTTCGAC
TGGTCGACGC GCTGGTTGAT GGGGATGTTC GCCTGGATTA TCGACTTTCT ATTTTATGTC
ATGCCGTTCA TGGTTGCGGG AGTCGTCGCC TTTTGTGTGG CGTTTTCGGC GGTATTGAGC
AATTCCCCGG CGTTTGCCAA CCAGGCCCTG ACCATCGTTG GCGTTGTCGC GCTCATGTAT
GTGATCTTCA TGTTTATGAG CAGCGTTTCG ATGGTCGGTC GCCTGATCTA TGTGCAGGAT
GCTTCACCGG AGCATGCGAT GAGTATGCGC TCCTTGCGCG AAGCGTTGCG ACCCGGCGCG
CGCGGGGTGT ACTTCCGGGC GCGTCTGGTG TCGCTGCCTG CCTATTTGCC GGCGATCGCC
CTTGGAGGGG TGACGTTCCT GGTCGCCAAC CTGACCATTC CCGGCGTTCT GGTGATCGTT
CTGGTGCTGA TCTGGCTGAC GTTGATCGCG CTGCTTTATG CGCACCTTCT CGTTGCTCAG
ATATATGTTG CAGCGGAACG CGAACTCGAG CGACGCGGAC TCTCCCGTGT CAGTGAACTG
ATGTAG
|
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| Protein sequence | MDLRTAIRTV HSDPLWWRKI LIGGALFMSV VGAPFAGGWI IEYIDNSRKG YPAPLPPWFD
WSTRWLMGMF AWIIDFLFYV MPFMVAGVVA FCVAFSAVLS NSPAFANQAL TIVGVVALMY
VIFMFMSSVS MVGRLIYVQD ASPEHAMSMR SLREALRPGA RGVYFRARLV SLPAYLPAIA
LGGVTFLVAN LTIPGVLVIV LVLIWLTLIA LLYAHLLVAQ IYVAAERELE RRGLSRVSEL
M
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