| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0322 |
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| Symbol | |
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| ID | 5537784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 396028 |
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| End bp | 399267 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892486 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_001430473 |
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| Protein GI | 156740344 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.204908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.140126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTTC AGCCTGTCGA TACCAGGGTC AACTTTCCGC GACTCGAGGA ACAGATTCTC
GATCTGTGGC AGCGCAAGCA GATTGTCGAG CGCAGTCTGG AATCTGGCGA TAAGCCGTTC
GTCTTCTACG AAGGACCGCC GACGGCGAAT GGTCGTCCCG GCATCCACCA TGCCATCTCA
CGCATCTTCA AAGATGTCAT CTGCCGCTAC CGCGCTATGC AGGGTTACAA GATCATCGGG
CGACGCGAAG GGTGGGACAC CCACGGTCTG CCGGTGGAGA TCGAGGTCGA AAAGAAACTC
GGCTTCAGCG GCAAGCCCGA CATCGAAAAA TATGGTGTAG CGGAGTTCAA TGCGCAGTGC
CGCCAGAGCG TCTGGGAATA TATTCAGGAC TGGCGCCAGT TCACGCGCCG CATTGCCTAC
TGGGTGAGCG AAGACGCCTA TATCACCTAC GAAAATGATT ACATCGAGTC GCTCTGGTGG
ATCTTCCGTC AGTTATGGGA TCGCGGCTTG CTCTTCCGCG ATTACAAGGT CTCGATGCAC
TGCCCGCGCT GCGGCACATC TCTCTCGGAT CATGAAGTAT CGCTCGGCTT CAAGGACGAT
GTAGACGATC CGAGTGTGTG GGTGAAGTTC CGCGTGCGCG AGACGAGCCA CGAAGCGTTG
CGTGGAGCAT CGTTCGTGGC GTGGACGACG ACCCCCTGGA CGCTTCCCGC AAATGTGGCG
CTTGCTGTTA AGCCCGACGC CGCGTATGTC GTCGTATCAC ACGACGGCGA ACGGTTCGTG
CTGGCGGAGG CGCTGCTCCA CAGCGTTCTT GGCGACGGCG TGACCGTTGA GCGCACGTTC
CAGGGCGCCG ATCTGGTCGG CACGCGCTAC GAGAACCTGT TCGACGGCGT TCCCGCGCCC
GGTGACACGG TGGATTGGTC TCGCGCCTAT ACGGTCGTTG CCGATGATTT CGTGTCGCTG
GAGGATGGCA CCGGCATCGT ACACATCGCG CCGGCCTATG GCGACCTCGA GATCGGCAGG
AAGTACGGCT TGCCGACCCT CTTTTCGGTC GATCTGGCAG GCAATGTGCT GCCAGAGTTT
GCCTCGCTCG GCTTTGCCGG CAAGTTCTTC AAACAGGCGG ACCCCGACAT CACGCGCAAC
CTGAAGGCGC GCGGCTTGCT GCTGAGGAGC GGGCGTGTCA AGCACTCGTA CCCCTTCTGC
TGGCGCTGTG ATACGCCGCT GCTCTACTAT GCCAAACGCT CGTGGTACAT CCGCACAACC
GCGATGAAAG ATCGCCTGGT GGCGAACAAC CTGCTGATCC ACTGGGTGCC AGAGCACATC
CGCGATGGGC GATTCGGCAA CTGGCTGGAA AACAATATCG ACTGGGCTGT GAGCCGTGAG
CGTTACTGGG GCACACCCAT CCCGATCTGG ATGGCAGAAG ACGGCTACGC CGAATGCATC
GGCTCGCTGG CGGAACTGGA GCAGAAAGTC GGGCGCACCC TGAAGGACCT GGAACTGCAT
CGTCCCTATG TTGATGAGAT TACCTGGGTC GATCCGCAGC ACGGGTTGAT GCGCCGCATC
CCCGACGTTG CCGACTGCTG GTTCGACTCT GGCGCCATGC CCATTGCGCA GTGGCACTAT
CCGATGGAGA ACACCGAGAT TTACGAATTG GCGAAGCAAG CGGATTACAT TTGCGAAGCG
GTTGATCAGA CACGCGGCTG GTTCTACACG CTGCACGCCA TCTCCACGCT GCTCTTCGAC
CGTCCGGCAT TCAAGAATGT CATCTGCCTG GGGCACATTC TCGACGCCGA GGGTCAGAAG
ATGAGCAAGT CGCGCGGCAA TGTCGTCGAT CCCTGGACGG TGATGAACGA GCACGGCGCC
GATGCGCTGC GCTGGTATCT GTTCACTGCC GCGCCTCCCG GCAGCCCGCG CCGCTTCTCG
GCAGGGCTGG TCGCCGAAAG TTTGCGCAAG TTCCTGCTGA CGCTGTGGAA CACGTACGCA
TTCTTCGCCA CCTATGCCAA TCTCGATGGC TGGACGCCAA CGAAGGACGG CGTTGATCAG
CATCTCGATC CGGCGACCCT CGTTCCCATC GACCGGTGGG CGCTGGCGCG GTTGAACAGC
CTGGTGCGCA CCGTGACCGA TGCTTTCGAG GCGTATGATG TTACAACGGC AGCACGCGCC
ATCGAGGATT TTGTCGATGA ACTGTCGAAC TGGTATGTGC GACGCAACCG GCGGCGCTTC
TGGAAGAGCG AGCACGACCG CGACAAGCAG GCGGCATATG CGACGCTCTA CACCTGTCTG
CTCACGGTGG CAAAACTGGC AGCGCCCTTC GTGCCGTTCG TCGCCGAGGC GATCTACCGC
AACCTGGTGG GGCTGGAAGG GCACGAGGGG CAGACCGATA CACCGGAGAG CGTTCATCTT
GTCGCGTGGC CACAGGTCAA CGAAGCATTG CTCGAAGAGC GCCTGGTGGC AGATACAGAA
GTGTTGCTGA AAGCCGTTTC AGTCGGGCGC GCGGCGCGAC GCGCGGCAGG CATCAAGGTC
CGCCAACCAC TGCGCGAGTT GTGGGTGCGC GCGCTAACCC CGACCGCCCT CGAAGGTCTG
CGGCGCTTCG AGGCGGAACT GCGCGACGAA CTCAACGTCA AAGCGGTACG CTACCTCGAC
AGCACTGCCA CGCTGGTCGA GTACCGCCTC AAGCCCAACC TGCGGTTGGT TGGTCGCAAA
TATGGAAAAC TGGTGCCTGC CATCACCGCA GCACTCCGCG ATCTGACCGG TGATGCGGCA
CGCGCGGCGG CGCAGGCAGT CGAAGCCGGA GAAACCATTA CACTCACGCT CGAAGGGCAG
GCGATTGACT TGCTGCCAGA AGAAGTGCTG GTTGAGAGCA GTTCGCCAGA AGGGTACGCG
GTAGCGGAAG ATGGCGGCGT CCTTGTGGCG CTCGACACAA CCCTGACGCC GGAGTTGACG
ATGGAGGGGC TGGCGCGCGA ATTGGTGCGC AACATCCAGG ATGCGCGCAA AGACGCCGGG
TTTGCCATTA GCGATCGGAT CATCGTCTTC CTTGGCGGCG CCGACGGTGA TGCCGCAGTG
GAAGCGATGC TGCGCGCCTG GGGCGACTAT GTGCGCGAAG AGACGCTGGC GGACGACCTG
CGGCTCTGCG CGCCGCCGGA TCACGTCCAC ACTACCTCGC TCGAACTCGA TGAAGGGCGC
ACGCTCACCA TCGGCGTGAG CAGGGGCGGA ACTGAGACCC GGCCGCATGG GTACGTCTGA
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| Protein sequence | MAFQPVDTRV NFPRLEEQIL DLWQRKQIVE RSLESGDKPF VFYEGPPTAN GRPGIHHAIS
RIFKDVICRY RAMQGYKIIG RREGWDTHGL PVEIEVEKKL GFSGKPDIEK YGVAEFNAQC
RQSVWEYIQD WRQFTRRIAY WVSEDAYITY ENDYIESLWW IFRQLWDRGL LFRDYKVSMH
CPRCGTSLSD HEVSLGFKDD VDDPSVWVKF RVRETSHEAL RGASFVAWTT TPWTLPANVA
LAVKPDAAYV VVSHDGERFV LAEALLHSVL GDGVTVERTF QGADLVGTRY ENLFDGVPAP
GDTVDWSRAY TVVADDFVSL EDGTGIVHIA PAYGDLEIGR KYGLPTLFSV DLAGNVLPEF
ASLGFAGKFF KQADPDITRN LKARGLLLRS GRVKHSYPFC WRCDTPLLYY AKRSWYIRTT
AMKDRLVANN LLIHWVPEHI RDGRFGNWLE NNIDWAVSRE RYWGTPIPIW MAEDGYAECI
GSLAELEQKV GRTLKDLELH RPYVDEITWV DPQHGLMRRI PDVADCWFDS GAMPIAQWHY
PMENTEIYEL AKQADYICEA VDQTRGWFYT LHAISTLLFD RPAFKNVICL GHILDAEGQK
MSKSRGNVVD PWTVMNEHGA DALRWYLFTA APPGSPRRFS AGLVAESLRK FLLTLWNTYA
FFATYANLDG WTPTKDGVDQ HLDPATLVPI DRWALARLNS LVRTVTDAFE AYDVTTAARA
IEDFVDELSN WYVRRNRRRF WKSEHDRDKQ AAYATLYTCL LTVAKLAAPF VPFVAEAIYR
NLVGLEGHEG QTDTPESVHL VAWPQVNEAL LEERLVADTE VLLKAVSVGR AARRAAGIKV
RQPLRELWVR ALTPTALEGL RRFEAELRDE LNVKAVRYLD STATLVEYRL KPNLRLVGRK
YGKLVPAITA ALRDLTGDAA RAAAQAVEAG ETITLTLEGQ AIDLLPEEVL VESSSPEGYA
VAEDGGVLVA LDTTLTPELT MEGLARELVR NIQDARKDAG FAISDRIIVF LGGADGDAAV
EAMLRAWGDY VREETLADDL RLCAPPDHVH TTSLELDEGR TLTIGVSRGG TETRPHGYV
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