Gene Rcas_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0321 
Symbol 
ID5537783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp394720 
End bp395586 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content65% 
IMG OID640892485 
Productrhodanese domain-containing protein 
Protein accessionYP_001430472 
Protein GI156740343 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.183819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTG ACCATCTCGT ATCTCTCGAC TGGCTCGCAG AACGCCTGAA TGACCCGGAT 
ATCCGCATTG CCGACCTGCG CTGGTATCTG CTGGAGCCGG GGCGCGGGCG CACAGAGTAT
CTGGAAGCGC ACATCCCCGG CGCGGTATAT CTCGACATTG ACACCGATCT TTCCGCCCCG
CCGTTTCAGG GACCAGGACG CCATCCCATT CCCGCACCGG AAGCCTTCGC CGCTGTCGCG
TCGCGCACCG GGATTGGTTC CAAGACGCAT GTCATAGCCT ACGACAGCGT CGGTGGCGCG
TATGCAGCGC GTCTCTGGTG GTTGCTGCGC TACTTCGGGC ACGAGCGCGT GTCGCTCCTC
GATGGCGGAT GGCCCGCGTG GGTCGCTGCC GGTTTGCCGG TCGAGTCAGG CGAGGTGACG
CCGCCGCCAA CGATGTTCAT CCCGCACCCA AACCGGGCGA TGGTAGTGGA TGCTGATACT
GTGGATGTGT TGCGCCGCGA TCCGCGCGTG CTGATTCTCG ATGCGCGCGC AGCGGAACGT
TACCAGGGGA TCGCCGAACC ACTCGACCCG CGCGCAGGTC ATATTCCGGG AGCAGTGTCT
GCGCCATACG CCGACAATGT CGATGCCGAC GGACGGATGC GTTCGGTGGA GGAACTGCGG
GCGCGCTACG CTGCACTTGG CGCCGACCGT GCCGAAACCA TCGTCTGCTA CTGCGGCTCT
GGCGTCACCG CTGCACATAC CATCCTGGCG CTCGCACGCG CCGGTTGGAA GAACACACTC
CTCTACGAAG GCTCCTGGAG CGACTGGTCG CGTGACCCCG CTCGCCCCGC TGCAACCGGA
TCGGAACCGT GGGGCGGTGA AGGTTGA
 
Protein sequence
MTTDHLVSLD WLAERLNDPD IRIADLRWYL LEPGRGRTEY LEAHIPGAVY LDIDTDLSAP 
PFQGPGRHPI PAPEAFAAVA SRTGIGSKTH VIAYDSVGGA YAARLWWLLR YFGHERVSLL
DGGWPAWVAA GLPVESGEVT PPPTMFIPHP NRAMVVDADT VDVLRRDPRV LILDARAAER
YQGIAEPLDP RAGHIPGAVS APYADNVDAD GRMRSVEELR ARYAALGADR AETIVCYCGS
GVTAAHTILA LARAGWKNTL LYEGSWSDWS RDPARPAATG SEPWGGEG