Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0318 |
Symbol | |
ID | 5537780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 391241 |
End bp | 392392 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640892482 |
Product | UBA/THIF-type NAD/FAD binding protein |
Protein accession | YP_001430469 |
Protein GI | 156740340 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.139087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACTGT CTTCTCTGTC GAATGAAGAG ATTCGCCGGT ATTCGCGGCA TTTGATTCTG CCTGAGTTTG GCATGGAAGG GCAACGCAAA CTCAAGCAGG GCAGCGTGCT CCTGATCGGA ACCGGCGGGC TTGGGTCGCC GCTGGCGCTG TACCTTGCCG CTGCTGGCGT GGGACATATC GGTCTGGTTG ATTTCGACAT CGTCGACGAA AGCAACCTGC AACGCCAGAT CATTCACGGC ACATCCACGC TGGGCATTCG CAAGACCGAG TCGGCAAAGA TGCGCTTGCG CGATCTCAAT CCGCACATCG ATATCGCCAC GTATGAGACG CAGATCACAT CCGAGAACGC CTTTGACTTG ATGCGTCCCT ACGATGTCAT CGTCGATGGC ACCGACAACT TCCCGACGCG CTACCTGACG AACGATGCCT GCGTCATGCT CGGCAAACCC AACGTCTACG GTTCGATCTT TCGCTTCGAG GGGCAGGCGA CGGTCTTTTC GCCGAAGCAT GGCGGTCCGT GCTACCGTTG TCTCTACCCT GAGCCGCCGC CGCCGGGTCT GGTGCCGAGT TGCGCCGAAG GGGGCGTGCT CGGCGTACTT CCCGGCGTCA TTGGAACAAT CCAGGCGACC GAGGCGATTA AGCTGCTCAC CGGCATCGGC GAGCCGCTGA TCGGGCGTTT GCTGCTCTAT GATGCCCTGG CAATGCGCTT CCGCGAACTG AAATTGCGTC GCAACCCTGA TTGTCCGGTG TGTGGTGATC ACCCAACCGT CACGGAACTG ATCGATTATC AGCAGTTCTG CGGCATTTCG CCGGAAGAAG CGCACCGCGA CGCAACCATC GAGATCACGC CGGCCGAAGT CGCCGAATGG TTGCAGAGCG ATCATCCGCC CTTCCTGCTC GATGTGCGCG AGGCAAATGA GTGGGAGATC TGCCATCTGC CGGGCGCCGT GCGTATTTCA GTCAACGAAC TTGCTGAGCG GATGAACGAA CTCGACAGTG CGGTCGAAAT GGTCGTCTAC TGTCGCAGCG GCGTGCGCAG CGCACGCGCG GTCGACCTGT TGCGCCAGGC CGGTTTCCGC AAGGTGAAAA ACCTGGCCGG CGGCATCCTC CGCTGGGCGG ATGAGGTGGA CCCCGGCGTG CCAAAGTACT GA
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Protein sequence | MILSSLSNEE IRRYSRHLIL PEFGMEGQRK LKQGSVLLIG TGGLGSPLAL YLAAAGVGHI GLVDFDIVDE SNLQRQIIHG TSTLGIRKTE SAKMRLRDLN PHIDIATYET QITSENAFDL MRPYDVIVDG TDNFPTRYLT NDACVMLGKP NVYGSIFRFE GQATVFSPKH GGPCYRCLYP EPPPPGLVPS CAEGGVLGVL PGVIGTIQAT EAIKLLTGIG EPLIGRLLLY DALAMRFREL KLRRNPDCPV CGDHPTVTEL IDYQQFCGIS PEEAHRDATI EITPAEVAEW LQSDHPPFLL DVREANEWEI CHLPGAVRIS VNELAERMNE LDSAVEMVVY CRSGVRSARA VDLLRQAGFR KVKNLAGGIL RWADEVDPGV PKY
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