Gene Rcas_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0317 
Symbol 
ID5537779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp390936 
End bp391217 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content56% 
IMG OID640892481 
ProductthiamineS protein 
Protein accessionYP_001430468 
Protein GI156740339 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1977] Molybdopterin converting factor, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.114297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCA CCGTAACGAT TCCAACCGCA CTGCGCCAGT ACACCGGCGG CAACGCCAGT 
GTCGCGCTGG CAACCGGTTC TGTAGGGCAG ATTCTGGCTG CATTGAGCGA GCAGTACCCG
CAACTTGGCA AACATCTGTA CAACGAGCAG GGTACGCTGC GCAGTTTTGT CAACATTTAT
GTCGGCGATG AGGATATTCG CCACCTTCAG GGGATCGAAA CCCCTGTCCC TGATGGCGAA
ACCGTCAGTA TTATTCCGGC AATCGCCGGC GGCGTTCGAT AA
 
Protein sequence
MAVTVTIPTA LRQYTGGNAS VALATGSVGQ ILAALSEQYP QLGKHLYNEQ GTLRSFVNIY 
VGDEDIRHLQ GIETPVPDGE TVSIIPAIAG GVR