Gene Rcas_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0313 
Symbol 
ID5537775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp388230 
End bp388688 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content61% 
IMG OID640892477 
ProductFe-S metabolism associated SufE 
Protein accessionYP_001430464 
Protein GI156740335 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0231969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTGT CCGACATACC TGCCGGTCTG CCGCCGCGTC TCCGCGCGAT TGTCGAGGAG 
TTCCGCGCGG CGGACCGGGC GGAGAAACTG GAGTTGCTGC TCGAATACGC CGACCGTCTG
CCGCCATTGC CGGAGCGGTG GCGGGATAAT CGCGCCGCGA TGGAACAGGT CCATGAATGC
GCAACTCCAG TCTATGCCAC TGCAGAGTCG CACGAGGGAC GTCTGATATT CCATATCGAT
GTTCCCGAAG AGTCGCCGAC TGTGCGCGGA TATGCGGCGA TCTTGCGCGA AGGGTTGGAA
GGCGCCGCGC CAGAGATGGT GCTCGCCATT CCTGGCGATT TCTTCTATGC GATGGGTTTG
CAGCATGTGC TGTCGCCACA GCGTCTGAAC GGCATCAGTT ACCTGCTCGC ATACCTGAAA
CGGCTCGCCG CGCGCGAACT GGCAAAGCGG AACATGTGA
 
Protein sequence
MAVSDIPAGL PPRLRAIVEE FRAADRAEKL ELLLEYADRL PPLPERWRDN RAAMEQVHEC 
ATPVYATAES HEGRLIFHID VPEESPTVRG YAAILREGLE GAAPEMVLAI PGDFFYAMGL
QHVLSPQRLN GISYLLAYLK RLAARELAKR NM