Gene Rcas_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0307 
Symbol 
ID5537769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp383072 
End bp383470 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content59% 
IMG OID640892471 
ProductNifU family SUF system FeS assembly protein 
Protein accessionYP_001430458 
Protein GI156740329 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0630803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC TCTACCGCGA ACTTATTCTC GAACACTATA AACACCCGCG TCGTCGCGGT 
CGGCTCGACC ATCCCGACGT CAGCGCCGAG GAGCACAATC CCCTGTGCGG CGACCGGGTG
CGGATCGATC TGCGGATCGA ACATGGCGTC ATCACCGATG CGCGCTTCGA TGGACGCGGT
TGCGCGATCA GTCAGGCGTC CGCCTCGATG CTGACCGATG AAATCGTCGG GATGCCGGTC
GAACAGGCGA AGCAGTTCAG CAAAGAACAT CTCCTGGCGC TGATCGGCAT TCCACTGAGC
CATAATCCGG TGCGCATCAA ATGTGCGCTG CTTCCGCTCA AGACGCTCAA GGCAGGGTTG
TATGGCGTGG GTCATGCGCC CGATGATGAT GAATTGTAA
 
Protein sequence
MDDLYRELIL EHYKHPRRRG RLDHPDVSAE EHNPLCGDRV RIDLRIEHGV ITDARFDGRG 
CAISQASASM LTDEIVGMPV EQAKQFSKEH LLALIGIPLS HNPVRIKCAL LPLKTLKAGL
YGVGHAPDDD EL