| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0306 |
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| Symbol | |
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| ID | 5537768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 381822 |
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| End bp | 383066 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892470 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_001430457 |
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| Protein GI | 156740328 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0801844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAA GCGCCGCTCT GAGCCTGTTC GATATCGTCG CACTGCGGCG GGAGTTCCCG
ATTCTCAATC AGTCGGTGAA TGGTAAGACG CTGGCGTTTC TCGATAGCGC TGCGTCGTCG
CAAAAGCCGC GCCGTGTGAT CGATTGCCTC GAGGAGTATT ATCGGCGCTA CAACGCGAAT
GTGCATCGTG GCATTTACCG CCTGAGCGAA GAGGCGACGT TTGCCTTCGA GCGGGCGCGC
GGCAAGGTGG CGCGTTTCAT CAATGCTCGC AGCCAGCGCG AGATCGTCTT TGTGCGGAAT
ACGACTGAGG CGATCAATCT GGTGGCGCGC AGTTGGGGTG ATGCAAACCT GCGCGCGGGG
GATCGTATTC TGCTCAGTAT CATGGAGCAC CACTCGAACC TGGTGCCCTG GCAGATGCTG
GCGCAGCGTA CCGGCGCGCA ACTGGAGTTC CTGCCGATCG ATGGCGAAGG TCGCCTGGCG
CTCGACCATC TGGACGCGCA ACTCGCAGGG GTGCGCCTGG TGGCGATTAC GCAGCAGTCG
AATGTGTTGG GAACGATCAA TCCGGTGGCG GAGATTGCAC GGCGCGCGCA CGCTTGCGGC
GCGCTCGTGC TGGTGGACGG CGCGCAGAGC GTACCGCATA TGCCAGTGGA CGTGCAGGCG
CTCGATATCG ATTTCCTGGC GTTCAGCGGG CATAAAATGT GCGCTCCGAC CGGCATCGGC
GTGCTGTGGG GGCGGCGTGC AATCCTGGAG CAGATGCCGC CGTTCCTTGG CGGCGGTTCG
ATGATCAGGG TGGTGGGGCT GCACGAATCG ACATACGCCG ACGTTCCGGC GCGCTTCGAG
GCGGGAACGC CGGCGATTGC CGAGGCGATT GCGCTCGGTG AGGCGGTTGA TTTTCTGCAA
GAGATCGGCA TGGATCGAAT CTCCGCCCAC GAGCGCGAAT TGCTGGGGTA TGCGCTTGAA
CGCCTGAGCG AAGTCGAAGG GCTGCGGGTG TATGGTCCGA CAACGACCGA GATGCGCGGC
GGCGCGGTGA GTTTCACGCT CGACGGCGTG CATCCGCACG ATGTTGCGGC AGTGCTCGAC
AGTGAGGGGA TTGCAGTGCG CGCCGGGCAT CACTGTGCGC AACCGTTGCA CGCGCACTAC
GATATTCCTG CTACTACGCG CGCATCGTTC TATCTGTACA ACATTCCAGA AGAGGTTGAT
CGACTGGTTG CCGCGCTGCA CAAGGCGCGC ACCCTGTTCG GGTGA
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| Protein sequence | MTASAALSLF DIVALRREFP ILNQSVNGKT LAFLDSAASS QKPRRVIDCL EEYYRRYNAN
VHRGIYRLSE EATFAFERAR GKVARFINAR SQREIVFVRN TTEAINLVAR SWGDANLRAG
DRILLSIMEH HSNLVPWQML AQRTGAQLEF LPIDGEGRLA LDHLDAQLAG VRLVAITQQS
NVLGTINPVA EIARRAHACG ALVLVDGAQS VPHMPVDVQA LDIDFLAFSG HKMCAPTGIG
VLWGRRAILE QMPPFLGGGS MIRVVGLHES TYADVPARFE AGTPAIAEAI ALGEAVDFLQ
EIGMDRISAH ERELLGYALE RLSEVEGLRV YGPTTTEMRG GAVSFTLDGV HPHDVAAVLD
SEGIAVRAGH HCAQPLHAHY DIPATTRASF YLYNIPEEVD RLVAALHKAR TLFG
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