Gene Rcas_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0304 
Symbol 
ID5537766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp379755 
End bp380537 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content58% 
IMG OID640892468 
ProductFeS assembly ATPase SufC 
Protein accessionYP_001430455 
Protein GI156740326 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.553044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.119713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAGCG ATCTGGTCAT CAAGGATTTG CGCGTCAGCG TCGAAGACAA AGAGATCCTC 
AAAGGGGTCA ATCTCACCGT CAAAGCCGGT ACGATCCACG CGATTATGGG GCCGAACGGC
AGCGGCAAGA GCACGCTGGC GTATACCCTG ATGGGACATC CCGGCTACAC GGTCACCGGC
GGCGAGGTCT GGTACCGTGA TCACAACATT CTCGAACTCG AACCGGACGA GCGCTCAAAA
CTCGGTCTCT TCCTCGCCTT CCAGTATCCG GTCGCCATTC CGGGGGTGAC GGTGGCGAAC
TTCCTGCGCG CTGCGATCAA TGCGCATCGC GCCGAGGAGG GGAAGGACCC GAAGGAAACC
GCCATTCCGA TGGCGCAGTT CCGTAAGCAA CTGCGTGAGC AGATGGCAGC GCTCGGCATC
GATGAAAGTT TCGCTCGCCG CTATCTGAAC GAGGGCTTCT CCGGTGGCGA GAAGAAGCGC
ATCGAGATTT TGCAGATGGC AATGCTGGAA CCAAGCATGG CAATCATGGA CGAGACCGAC
TCGGGGCTCG ACATCGATGC GCTGAAAATC GTTGCGCAGG GCGTCAATAC GCTCTATGCG
CAGCATCCTG AGATGGGGGT GCTGGTCATT ACGCACTATC AGCGGTTGCT GAACTATATC
AAGCCGCATT TTGTGTCGGT GCTCATGGAT GGTCGAATTG TGCGCGAGGG CGGACCCGAA
CTGGCGCTCG AACTCGAAGA GAAGGGGTAC GACTTCCTCC GCGAGGAGGT CGCAAGCGCG
TGA
 
Protein sequence
MNSDLVIKDL RVSVEDKEIL KGVNLTVKAG TIHAIMGPNG SGKSTLAYTL MGHPGYTVTG 
GEVWYRDHNI LELEPDERSK LGLFLAFQYP VAIPGVTVAN FLRAAINAHR AEEGKDPKET
AIPMAQFRKQ LREQMAALGI DESFARRYLN EGFSGGEKKR IEILQMAMLE PSMAIMDETD
SGLDIDALKI VAQGVNTLYA QHPEMGVLVI THYQRLLNYI KPHFVSVLMD GRIVREGGPE
LALELEEKGY DFLREEVASA