| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0292 |
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| Symbol | |
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| ID | 5537754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 360543 |
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| End bp | 363041 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892456 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001430443 |
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| Protein GI | 156740314 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4745] Predicted membrane-bound mannosyltransferase |
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| TIGRFAM ID | [TIGR03663] conserved hypothetical protein TIGR03663 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.395446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATTG CCGAACTTCC GCCACAGGTC GCTGCACCGC CTGGCGACAG TGCAACTCCT
GCAACGACGC GCCCGCATGC CGCGATTATC TCGCTCGAAC AGGCCGCCTA TCTCGCCATT
CTTCTGCTGG CGGTAATCTC GCGCCTGTGG GGGCTTGGTG ACCGTGCACT CCATCACGAT
GAGACATTGC ACGCCTACTT TTCCTGGCTG GTCTTCCGTG GCGAAGGGTA TGTCCACGAC
CCGCTGCTGC ACGGGCCGTT TCTCTACTTT TTTGGCGCGC TGATCTATTT CTTCTTTAGC
GTCAGCGACG CAACCGCGCG CCTGGGTCCG GCGCTGTTCG GCATCGCGCT GGTGATGCTG
CCGTACCTGC TGCGCCGCGA ATTGGGGCGC AGCGCGGCGC TGCTGGCGTC GGTCTATATC
CTCATTTCAC CCGCATTTAT GTACATCGCG CGCTTCATCC GTCACGACCC CTATACGATT
CTGTTTGAGT TGCTGGCGCT GATCGGCGCG GTGCGCTATG CGACGACCCG CCGCCCGCTG
TGGTTGTATG TGGTCGCACT GTCGCTGGCA TTGATGTTCG TGACGATGGA GACGTTCTTC
CTGTACATGG CGATCTTCGC GCCACTGGTT GCGCTGGTAT TCTTCTGGAA GGTGTGGAAG
CCGGGCGCAG CAGTGTTGGC AGCGCTGGGG GTCGCAGTCG TGGCGCTCGT CTTCTGGCTG
CCGGGGTACC CGGAACGTCC GTTTCCGAGC AGCGATACGG TCAATCGGGT CGCCGGACCG
TATATCTGTC CCAGTGAATT ACAACCCTTC CCGCCCCCTA ATCCGATGCG CGTCGCGCGT
CCCGGACCGA TCTTCGGTTG GTCCCCACTG GCGACGTTCG ACAACAATTA TGCGTTGTGC
GTCCGCCATC AGCCAGACGA TAATTTCGGG TTGTATTTCA TCAAACTCGG CGAGTTCGTC
AATCATCCGG CGATTCTGAC CGGGCTTGTG CTCGTTCTGG CGACGCTGGC GGCGCTCTGG
TGGGTCGTCT GGCGGCGACG CGATGCGACC GGCGCGACAA TCTGGGAACA CGCCTGTGCC
GGCGGTGACG CAACGGTAGC GACGTTCGCA AGTCTGGGAC GGGACCGCCG CCTGCTCATT
GCCGGCGGAT TGTTCTTCCT GGTCTATACC CTGTTTTTTA CTGCCTTCCT CACCAACACT
GCCGGGGTGA TCACCGGCAC AACCGGCTCG CTCCTCTACT GGCTTGCGCA GCACGAAGTT
GAGCGCGGTG GGCAGCCGCC GCATTACTAC GCGGTGCTGC TGGCGATCTA TGAGCCGCTG
CTGATCATGT GGGGTGTGGT GGGTCTGGCA ATGGCGGGGG TGCTGGGGTG GCGGCGGGTG
ATGCGCAGGA ACCGTGATGC AGATTCTGCC GCCGATGGGC GCGAATCTGG CGCCGATGAC
GAAAGGGCTT CGAGTGGCGA CGATCCGGTT GCCTGGCTGC CGCTCGTGCT AGCGTGGTGG
AGTATCGCAA CATTTGCGCT CTATTCGTGG GCGGGCGAAA AGATGCCCTG GCTGACAGTA
CACGTTGCGC TGCCGCTGAC GTTACTGGGC GCATGGGCGG CTGGGCGCGT TCTGGTGTGG
TGGCGCCGCG GCATCACCGC CGAAGCGGAG CGTAACGGCT TCTCTCTGAG CCGGATCGTT
CGCCCGTTCC CGATCTTTCT CGGGCTGCTG ACGGTTATCA GCATCTACTG CCTGCTCCTG
ATCACCGTGA CCATCCGCGC CGATGCGCAA CCGGCAGCAT TAACGCCGTG GATTGCGCCA
CTCTGGATGG TGCTGATGGC GCTGCTCACG GCAGGCGCCT GGGTGCTGCG CGGTCGGCGC
TGGACGACCG GCGCGCTGGC GGCGGGTGTG ACGCTGATCG TCGCCGCGTA CACGCTACGC
AGCGCCTATC AACTCAGCTT CCGCTATGGC GACATACCGC GCGAAATGAT GATCTACACC
CAGACGTCGC CGGATGTGAA GCGGGTGATC GACCGGCTCG ATGAAGCGCT CCGCCGTCGC
AGCAATGCAA CGACTGCAAC CGTCTGGTAC GATAACGAGA CCGTGTGGGA CTGGTACCAT
ATCCGTTTTG CCCGCGCCGA GGAACAACCG CCGCTCTTGC AGCGCGCGCC GGGGGACGAT
GTGATTGCCG TGCTCATGCT GCTCGAAAAC TACGAGAACG AGCAGAACCG CCGGTTTCTG
GAAGGGTTTC TGGTTCAGCG CTACCCGTTG CGCTGGTGGT TCCCGGAAGA AGAGACCTAC
CGCCTGCCGC GCGACTGGAT GACAGCGCCG GTCGACAGGC AATCGTCGCT GTTGATGCGT
ATGCTGCGCC AACCGTTCGA CCCGCGCACT TCGCAACAAT TCTGGCAGTA TGTGTTGTAC
CGCGTTCCGC CTCATCCGCT CGGCTCAACC GACTTTGTCG TCGCGGTGCG TCCCGAAATC
GCGCCGGAGA TGGGGTTGGG GTTCGGCGGC GAGCGGTAG
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| Protein sequence | MSIAELPPQV AAPPGDSATP ATTRPHAAII SLEQAAYLAI LLLAVISRLW GLGDRALHHD
ETLHAYFSWL VFRGEGYVHD PLLHGPFLYF FGALIYFFFS VSDATARLGP ALFGIALVML
PYLLRRELGR SAALLASVYI LISPAFMYIA RFIRHDPYTI LFELLALIGA VRYATTRRPL
WLYVVALSLA LMFVTMETFF LYMAIFAPLV ALVFFWKVWK PGAAVLAALG VAVVALVFWL
PGYPERPFPS SDTVNRVAGP YICPSELQPF PPPNPMRVAR PGPIFGWSPL ATFDNNYALC
VRHQPDDNFG LYFIKLGEFV NHPAILTGLV LVLATLAALW WVVWRRRDAT GATIWEHACA
GGDATVATFA SLGRDRRLLI AGGLFFLVYT LFFTAFLTNT AGVITGTTGS LLYWLAQHEV
ERGGQPPHYY AVLLAIYEPL LIMWGVVGLA MAGVLGWRRV MRRNRDADSA ADGRESGADD
ERASSGDDPV AWLPLVLAWW SIATFALYSW AGEKMPWLTV HVALPLTLLG AWAAGRVLVW
WRRGITAEAE RNGFSLSRIV RPFPIFLGLL TVISIYCLLL ITVTIRADAQ PAALTPWIAP
LWMVLMALLT AGAWVLRGRR WTTGALAAGV TLIVAAYTLR SAYQLSFRYG DIPREMMIYT
QTSPDVKRVI DRLDEALRRR SNATTATVWY DNETVWDWYH IRFARAEEQP PLLQRAPGDD
VIAVLMLLEN YENEQNRRFL EGFLVQRYPL RWWFPEEETY RLPRDWMTAP VDRQSSLLMR
MLRQPFDPRT SQQFWQYVLY RVPPHPLGST DFVVAVRPEI APEMGLGFGG ER
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