Gene Rcas_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0290 
Symbol 
ID5537752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp359131 
End bp359793 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content60% 
IMG OID640892454 
Productphosphoglycerate mutase 
Protein accessionYP_001430441 
Protein GI156740312 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.438239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA ACCTGTATCT GATCCGCCAC GGTGAGGCAT TTTCCAATGT TGAACCGATC 
ATGGGAGGAA TGCGCGGCGA CCGGGGATTG ACAGACCGGG GATTTGCGCA GGTTCACGCG
CTGGCGCGCC GCCTGGCGCG CGGCGAGATT GTCGCTGATG TCCTGTACGC CAGCACCCTG
CCGCGTGCCC GCATGACTGC TGAGCCTGTG GCGGAGGCGC TCAATCTATC GATTCACTGG
GACGACGACC TTCAGGAACT GCGTCCTGGC GAGGCGGATG GAATGCATAT CGACGAAGCG
CGCGCCCGCT TTCCGCAGAT GAGCCTGTTT TTCAAAGAGT ATTTCACTCC CATCGCCCCC
GGCGGTGAAA GTTGGGCCGG TTTTCAGTTT CGCGCATCGG CAGCGCTCGA GCGGTTGATT
ACCCGCCATC ACGGGCAGAC CATTGTGGCT GTGTGCCACG GCGGCATTGT CGAAGTGTCG
TTCCTCTTCA TGCTGGGGCT TGGACCGCAC GCACGCGGAC GAAATGCGTT CCACGTGCAG
AACACTGCTA TCACCCACTG GCGCCAGATG ACGAGCCGTG ATGGACGGAT GGAGTGGCAG
TTAATCACTC ATAACGACTG CTGGCACCTT CACGAACTGG AGTCTGAGCG TGACCACGCA
TGA
 
Protein sequence
MTTNLYLIRH GEAFSNVEPI MGGMRGDRGL TDRGFAQVHA LARRLARGEI VADVLYASTL 
PRARMTAEPV AEALNLSIHW DDDLQELRPG EADGMHIDEA RARFPQMSLF FKEYFTPIAP
GGESWAGFQF RASAALERLI TRHHGQTIVA VCHGGIVEVS FLFMLGLGPH ARGRNAFHVQ
NTAITHWRQM TSRDGRMEWQ LITHNDCWHL HELESERDHA