| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0286 |
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| Symbol | |
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| ID | 5537748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 354092 |
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| End bp | 354769 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892450 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001430437 |
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| Protein GI | 156740308 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGCG AGTACGATGT AATCACATTC GATTGCTACG GCACGCTGAT CGACTGGGAT
GGCGGCATCC GCAGCGGGTT TGCAGCATCC GCGCGTCGCG CCGGTGTCGA GATCGATCTT
GACGCTGCGC TTGCCGCCTA TCACACCATT GAGCCACAGG TCGAGGCGGG TGAATACCGC
CCCTACCGAC AGGTGCTGGC GGAGACCGCT CAGCGCGCAG CGGCGATGCT TGGTTGGCCT
ATGGACGACG ACACGGCGCA GTTCTTTGCG GCGACGCTGC CGCAGTGGAC GCCGTTCGAC
GACACGAATC CGGCGCTCGA GCGGTTGCAC GCCGCCGGGT ATCGCCTTGG CATCCTGTCG
AACGTAGACG ACGATTTGCT TGCAGCAACG ATCAGGCATT TCACTGCACC AATCGACCTG
ATCGTCACCG CGCAGCAGGT TGGCTCCTAC AAACCGGATA CTGGCCATTT CATTGCTGCC
CGAGAGCGGA TCGGCGGGTT GCGCTGGCTG CATGTCGCGC AGAGCCACTT CCACGATGTC
GTCCCCGCCG CACGCCTGGG ATTGCCGGTT GTGTGGGTCA ACCGCAAACG CGAACCGTTG
CCGCCAGACG GTCCCGCACC GCTCGCCGAA GTCCCCGATC TCCGGGCGTT TGTGGAGTGG
ATTGAGGGTC GGGGGTAG
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| Protein sequence | MTREYDVITF DCYGTLIDWD GGIRSGFAAS ARRAGVEIDL DAALAAYHTI EPQVEAGEYR
PYRQVLAETA QRAAAMLGWP MDDDTAQFFA ATLPQWTPFD DTNPALERLH AAGYRLGILS
NVDDDLLAAT IRHFTAPIDL IVTAQQVGSY KPDTGHFIAA RERIGGLRWL HVAQSHFHDV
VPAARLGLPV VWVNRKREPL PPDGPAPLAE VPDLRAFVEW IEGRG
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