Gene Rcas_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0269 
Symbol 
ID5537731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp336394 
End bp337017 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content60% 
IMG OID640892433 
ProductTetR family transcriptional regulator 
Protein accessionYP_001430420 
Protein GI156740291 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.60794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.358976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATA TCCTGAACGA ACCGGCATAC GGTCCCACCG CAGCACGCAT TCTGATGACG 
GCGACGCGGC TCTTCATGCA GCGCGGCTAT AGCGCGGTGT CGATCAGCGA CATTGTGCAG
GCTGCCGATG TGACCAAGCC AACGCTGTAC TACCACTTTT CCGATAAGGA AGAGTTGTTC
GTGCTCGTGG CGATCCATAT GCTGGCAGAA ATGTACGCAA CGATGCGGCG CGCCATCGCC
AATCAGCCCG ACACGCGCGC TCGCCTGGTT GCGCTGGCGC AGGTGCTGCT CCATGAACCC
AACAGCGACA CGCGCATGAT GCGTCATCAG GCGCGTGAGC ACCTGAACCC GGAGCGTCAG
CGTCGCCTGG CTGAAGCGTT CAAACGCTAC ATGGTCGATC CGTTGCGCGA GGTGATGCAG
CAGGGGATCG ACAGCGGTGA ACTGCGGGGA CGCAGCGCCG ATGATCTGAC CATGCTGTTC
CTGGGTCTGA TGGAAGGGTT CCAGCGCCAG ACGGCGCCGC CGGTCGAACC AGAGCGCAGC
GACATATATC AGTCGATTTC GACCGACCAT TTCTCTGCTG AGACGCTGGT CGATCTCTTC
CTTTACGGCA CTGCCGCGCG TTAG
 
Protein sequence
MQDILNEPAY GPTAARILMT ATRLFMQRGY SAVSISDIVQ AADVTKPTLY YHFSDKEELF 
VLVAIHMLAE MYATMRRAIA NQPDTRARLV ALAQVLLHEP NSDTRMMRHQ AREHLNPERQ
RRLAEAFKRY MVDPLREVMQ QGIDSGELRG RSADDLTMLF LGLMEGFQRQ TAPPVEPERS
DIYQSISTDH FSAETLVDLF LYGTAAR