| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0267 |
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| Symbol | |
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| ID | 5537729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 333643 |
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| End bp | 334476 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892431 |
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| Product | ABC transporter related |
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| Protein accession | YP_001430418 |
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| Protein GI | 156740289 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.481305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0672685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCTG AGACAGAATA CATTACTCCG GTCGGAGCGA TTGATTTCGT GACCGAGCCG
GTGGTGCGCA TTGAGCATGT GACGAAGGAA TTCATCACTG GTGGCAATCG CTTCCGCGCG
CTCGACGACG TATCGCTCGA CATTCATCGC GGCGAGATGG TCGCTATTAT GGGTCCGTCG
GGCAGCGGCA AAAGCACGCT GATGACGATC CTGGGTCTGC TCGATGTGCC GACGTCGGGT
TCCTACTGGC TCGACGGGCA GGACGTCAGC AAACTCGATC GTGTGCAGCA GGCGCGGGTG
CGCAACCAGA AACTCGGTTT CGTCTTCCAG AACTTCAACC TGTTGCCGCG GCTGACCGCC
CTGAAGAATG TGGAACTGCC GCTCGTCTAC GGGCGTGTCG GTGCGCGCGA GCGTGAGGAG
CGCGCCCGTC AGGCGCTTGA AGCCGTTGGA CTGGGCGCAA AAATGAACAA CCGCCCGAAT
GAACTCTCTG GCGGTCAGAA GCAGCGCGTC GCCATCGCCC GTGCGCTGGT GAGCAATCCG
GCAATGGTGC TCGCCGACGA ACCGACTGGC GCGCTCGACA CGCGCACCGG CGCGGAGATC
ATGGCGCTCT TTCGGCAGTT GAACCGCGAA CAGGGCATCA CCATCGTCAT CGTCACGCAC
GACCCGGAGA TCGGCAAGCA GATGGATCGG GTCATCGGGC TGCGCGACGG GCGGATAAGC
GAGAACATTT TGCAAGAGTA TTACCACGTT GTTCCGGCAG CGGAAGAACT GGAGTTGCCG
ATGCGCGAAA AAGAACCGGT CGCAGTGCCG GTTATCCGCA CAGAACAGGA GTAA
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| Protein sequence | MHPETEYITP VGAIDFVTEP VVRIEHVTKE FITGGNRFRA LDDVSLDIHR GEMVAIMGPS
GSGKSTLMTI LGLLDVPTSG SYWLDGQDVS KLDRVQQARV RNQKLGFVFQ NFNLLPRLTA
LKNVELPLVY GRVGAREREE RARQALEAVG LGAKMNNRPN ELSGGQKQRV AIARALVSNP
AMVLADEPTG ALDTRTGAEI MALFRQLNRE QGITIVIVTH DPEIGKQMDR VIGLRDGRIS
ENILQEYYHV VPAAEELELP MREKEPVAVP VIRTEQE
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