| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0266 |
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| Symbol | |
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| ID | 5537728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 332392 |
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| End bp | 333636 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892430 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430417 |
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| Protein GI | 156740288 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.17241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0445989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCAAAG AACTTGCACT CATGGCGGTT GACAGCCTGC GGGCGAACAT GTTCCGCTCG
CTGCTGACGA TGCTGGGCAT CATCATCGGC TCCGCCACGC TGGTCGCCGT TCTGTCGCTC
GGCAACGCAT TGCAGAGCCA GGTCTTCGAG CGCTTCGTCG ATCTGGGCAC GCGCCGGATT
GCGGTGCTCC CCGGCGATCC ACAGGCGCGT GGCGCGCGTG ATATTCCCGG CTACGGTCTG
CTGTCGATCC AGGACTATCG CGCGCTGGAG CAACTCGTGG CGCGTCATCC GGATGTCTTC
CGCACCATCG TTCCCGAAGT CTCGCTCCGC GTGCAGGCGC GTTTCGGCAG TTCTGCCGCC
AACCCAACCG TCGTTGGCAC AACGAAGGAC TACCAGTTGG TACAAACCGT GCCGGTGCAG
TATGGCCGGT TCCTGACCGA CGACGACGAC CGGCAGGCGG CGCGAGTGGC TGTGTTGGGC
GCGCTGATCG CCGAAGACCT CTTCGGCAAA GAGAACGTGA AAGATGCCAT CGGCAAGACT
ATCGAGGTCA ACGGACAACC GCTCCAGGTT GTCGGCATCT TGCGACAACT TGGCGGACCT
TTCTCTTCCG ATCAGCGTAT TCTGACGCCG GTCAGCACGG CGCGGTTGCG CATCGCCGGC
AGTCAGGACC TGCCTGGTCG CGGGTTGCAG ATGAGCAGCA TTCTGATCAG TTTGCAGAGC
GAACAGATGG TGGCGCGCGG CGAGGCGCTG GTGACTGCGA CATTGCGCGC AACCCGCAAT
GTGCCCGATG GCGCAATCGA TGATTTCCGC CTGAACCTGC CGACGCAGGC GCTCAACGTG
CTGGCAGGCA TCAACGGCGC GATCACGGGG TTTATTGCGC TGGTCGCGGG CATCAGCCTG
GTCGTCGGCG GCATTGGCAT TATGAACATC ATGCTGGTGG CGGTTACCGA GCGCACCCGT
GAAATCGGCG TGCGCAAGGC GCTTGGCGCC ACCGATAGCG ATGTGCTGAG TCAGTTTGTG
CTGGAAGCGG TCGCCATCAG CGTGGCGGGC AGTCTGATCG GCGTGACCGG CGCCATTGGA
TTGGTGACGC TGGTTGGCGC GGCTGCCGGG CTGTCCGTGT CGATCTCGTG GGTTGCCGTT
TTCCTGGCGC TGACCTTTGC GTGCGCTATC GGCGTCGGCT TCGGCTACTA TCCGGCGCGG
CGCGCGGCGC TTCTCCTGCC AATCGAAGCG TTGCGGTACG AATGA
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| Protein sequence | MFKELALMAV DSLRANMFRS LLTMLGIIIG SATLVAVLSL GNALQSQVFE RFVDLGTRRI
AVLPGDPQAR GARDIPGYGL LSIQDYRALE QLVARHPDVF RTIVPEVSLR VQARFGSSAA
NPTVVGTTKD YQLVQTVPVQ YGRFLTDDDD RQAARVAVLG ALIAEDLFGK ENVKDAIGKT
IEVNGQPLQV VGILRQLGGP FSSDQRILTP VSTARLRIAG SQDLPGRGLQ MSSILISLQS
EQMVARGEAL VTATLRATRN VPDGAIDDFR LNLPTQALNV LAGINGAITG FIALVAGISL
VVGGIGIMNI MLVAVTERTR EIGVRKALGA TDSDVLSQFV LEAVAISVAG SLIGVTGAIG
LVTLVGAAAG LSVSISWVAV FLALTFACAI GVGFGYYPAR RAALLLPIEA LRYE
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