| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0263 |
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| Symbol | |
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| ID | 5537725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 324618 |
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| End bp | 326192 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892427 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001430414 |
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| Protein GI | 156740285 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.542041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.03617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCA TTCTCGTGGC TGAACCGATT GCCGAGGAGG GGCTTGCCCG GCTCCGCGCC
GCCGCGCGCG TCGATGTCCG CACCGACCTC GACAAAGCCG GTCTGATCGC TATCCTTCCC
GAATACGATG CCCTGATCGT CCGTAGCGCC ACGAAAGTCA CTGCTGACGT GCTGGCGGCA
GGAACCCGTC TGCGCGTCGT CGGGCGCGCG GGAACGGGTG TGGACAATAT CGATCTCGAT
GCGGCCACCC GTCAGGGGAT TATGGTCGTT AATGCGCCTG CTTCGAACAG CGTCGCGGTT
GCAGAACTGA CCATAGGATT GATTCTGAGC CTTGCGCGGC ATATCCCGCA GGCGCATAGC
ACCGTGGTCG CAGGGAAGTG GGAACGCAAC CGCTTCATGG GATTCGAGGT GCGCAACAAA
ACGCTGGGTC TGGTCGGGTT AGGACGCATC GGCGCAGAAG TGGCGCGCCG CGCGCGTGGG
CTGGAAATGC ACGTCGTCGC CTATGATCCG GTCGTTTCGA CCGAACGCGC TCTGCAACTC
GGCGTGACCC TCGCGCCGCT CGAAGAGGTG CTGGCGCAGG CGGATATCGT GTCGCTCCAT
GTGCCGCTCA TCGATTCGAC CCGCAACCTG ATCAATGCAA TGCGCCTGGC GCAGATGAAA
CGTGGCGCCT ACCTGATTAA TGCGGCGCGT GGCGGCGTGG TGGACGAAAC AGCATTGCTC
GAAGCGATCA ATGGTGGTCA TCTTGCCGGC GCTGCGCTCG ATACCTATTC GACCGAGCCG
CCGGTCGGCA ATCCGCTCGT CGGACATCCG CGCGTGATTA CGCTCCCACA CCTGGGAGCC
TCCACCGTCG AAGCACAGGC GCTGACCGGC GTCGACGTCG CCGAGGGGGT TTTGGTGGCG
TTGTCCGGCG GGTCGCCGCA CTATGCGGTG AACGCCCCCT ACATCCCGCC AGAACATCGC
GGTCTTGTCG CGCCATACGT CGATCTGGGG CGGCGTCTCG GCATGCTCTG CGCCGGTCTG
GTTCACGATC CGGTGCATAA TTTCGAGATA GAGTATCGCG GTGAATTGGC GACGGTCGAT
ACTACGCCGG TGCGCCTTGC GGTTTTGCAG GGGTTGCTCG CCGGAACCCG CGAAGAACGG
GTGACGCCGG TGAATGCGCC GATCCTGGCG CGTGAGCTGG GTTTGAAACT GACCGAGTTC
TCGACCGAAG ACGCGGGAAA CTTCTCAGGA TTGCTGGTGT TGCGCGCGCA AACCAGCGAT
GGCGCGCGCG AGTTTGCCGG AACTATCCTG CGCGGCGAAC CGCATGTCGT TGAGGCGGAT
GGCTTTTGGG TCACGTTTGT GCCGGCCGGT CCGATGTTGT TCACCTACCA CCGCGATCGC
CCTGGCATGA TTGGGAAGGT CGGCACGCTC CTTGGCGAGG CGGATGTCAA CATCGCCAGC
ATGGATGTTG GGCGGCTGGC GCCGCGCGAG CAGGCGATGA TGGTGCTGCG CCTGGATGAC
CCGGTGCCGC CGCATGTCAT CGCGCGTCTG CGTGAAGAAC CGGATATTCA ACACGCGACA
ACATTGATCA TTTAG
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| Protein sequence | MDRILVAEPI AEEGLARLRA AARVDVRTDL DKAGLIAILP EYDALIVRSA TKVTADVLAA
GTRLRVVGRA GTGVDNIDLD AATRQGIMVV NAPASNSVAV AELTIGLILS LARHIPQAHS
TVVAGKWERN RFMGFEVRNK TLGLVGLGRI GAEVARRARG LEMHVVAYDP VVSTERALQL
GVTLAPLEEV LAQADIVSLH VPLIDSTRNL INAMRLAQMK RGAYLINAAR GGVVDETALL
EAINGGHLAG AALDTYSTEP PVGNPLVGHP RVITLPHLGA STVEAQALTG VDVAEGVLVA
LSGGSPHYAV NAPYIPPEHR GLVAPYVDLG RRLGMLCAGL VHDPVHNFEI EYRGELATVD
TTPVRLAVLQ GLLAGTREER VTPVNAPILA RELGLKLTEF STEDAGNFSG LLVLRAQTSD
GAREFAGTIL RGEPHVVEAD GFWVTFVPAG PMLFTYHRDR PGMIGKVGTL LGEADVNIAS
MDVGRLAPRE QAMMVLRLDD PVPPHVIARL REEPDIQHAT TLII
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