Gene Rcas_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0260 
Symbol 
ID5537722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp320038 
End bp320673 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content65% 
IMG OID640892424 
Productmolybdopterin-guanine dinucleotide biosynthesis protein A-like protein 
Protein accessionYP_001430411 
Protein GI156740282 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0746] Molybdopterin-guanine dinucleotide biosynthesis protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0272636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTT CCTGTATCAT AGTTGCCGGC GGCTCGAGCC GGCGCATGGG AAACGACAAG 
CGCCGGCTGC GATTGTGGAG CGATTGCGGT CCGATGCTGT TAGAACACAT GGTGACCCGC
GCTGCCCGTA TCAGCGACGA TGTCGTCGTC GCGTTGAATG ACCCGGCTGC CTGGAGCGGC
TTGCCTGCGC GTCTGGTATG CGACGAGATT GCACATGGCG GTCCGCTTGC CGGGCTTGCT
GCCGGTCTGG CAGTGTGCCG TTACGAATAC GCGCTGGCGA TGGCGTGTGA CCTGCCGCTG
GTGCAGGATG CATTGATCGA CGCGCTCCTG GCGTATCCGC GCCCTTACGA TGCGCTGGCG
CCGCTCCGAC CCAACGACGG CGCGCGCGCG CCGCGCAATG CGTTGGCAGT CGAGCCGCTC
CTGGCGGTCT ACCGGCGCAC GTGCCTCCCC GCAATCCGCG CCTGCCTCCA GCGCGGCGCG
CGCGCGCTCG TGGATCCGCT GGGCATGATC GATACCCGGT ATCTCGCGCC GGATGTCTGG
CGTCAGTATG ATCCGCACGG ATTGTCGTTC ATCAATCTCA ATCGACCGGA AGATGTCGCG
CGGGTGAAGA CCATCATTGC CGACGGAGGG CGATGA
 
Protein sequence
MSTSCIIVAG GSSRRMGNDK RRLRLWSDCG PMLLEHMVTR AARISDDVVV ALNDPAAWSG 
LPARLVCDEI AHGGPLAGLA AGLAVCRYEY ALAMACDLPL VQDALIDALL AYPRPYDALA
PLRPNDGARA PRNALAVEPL LAVYRRTCLP AIRACLQRGA RALVDPLGMI DTRYLAPDVW
RQYDPHGLSF INLNRPEDVA RVKTIIADGG R