| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0259 |
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| Symbol | |
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| ID | 5537721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 318739 |
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| End bp | 319881 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892423 |
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| Product | glycoside hydrolase family 42 protein |
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| Protein accession | YP_001430410 |
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| Protein GI | 156740281 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3934] Endo-beta-mannanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0628186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCT GCCTTTCTCG CCCGACTCGC CCCGCCAGGC TCTCTGTGAG CAGGTGCTGG
CTCGTTCTGT CGTTCGCCGT CATAATTGCC GGCAGTTGTG GTTCGGCGAA CAACCCGCCA
TCAGGCGCTC TTCCGCCGGT TACGGCTGAT GGTGAGCGCC TGCGTGCCGG AGGGCGCGAC
TTCGAGGTGC GTGGCGTCAA CTATATTCGA CCAACCGGCG ATGATGAGCG CCGGTGTTGG
ACGCTTCAGT TCGGCGCCGA TGCGAACTGT CCGTGGCGTA TGCCGCTCAT CGAATCCGAT
CTCGACGCCA TGCGCGCGCG CGGTGTCAAT ACGGTGCGCA TTTTCCTTAA CTATTACGTC
TTCGGCGGTC AGCGCGAAGC CGACGCCTCG TACCAGAAGA GTGATGCGCT GCGCCATCTG
GAAGAGTTCA TCGCAGCCGC TAATCAGCGG AGTCTCTATG TGCTGCCGGT ACTGCTCGTC
GAATATCCGC AAGATCAGTT CGGAGCAGAG TACTATGAGC GCGCACTCGA ATGGCATGTG
CGCCCGCTGG TGCGTCACTT TGCCGGCAGA CCAGGAATTC TGGCATGGGA CCTGTTCAAC
GAACCGGACA TTGGCAGTCC GGTCGATGTG CGCTGCTGGG ATTGGGACAA TGCCGATTTT
CCGCTCTGCT TTCCGCTTGC CGAGGAGCGT CAGCGGTTTG TGCGCACCGT TCACGATGAG
GTGAAGCGCC TCGACCCGGA ACGCTTGACA ACGGTGGGCA TGGCGTTTGC GAAGAGTTAC
TTCGAGCCAG CCGAGGCGTC AATCCGTATG GCGGATGTGG TCGATTTCTT CACGTTTCAC
TACTACGACA ACGAACCCTA CGACAGTGGA CGCTACCGGC AACACTGGTA CTACGGTGAA
GGTTTCCCTG CCGACCTGCG CCGCGCCATC GACGAATTGC ACGCGCTTGG TCTGCGGAAG
CCGGTCGTCG TGACTGAACT CGGTTTTCCG ACCGGTTTGG GGGCAACGCG CACGCTCGAC
GATCTGCGCC GTGATCAGCG GATTGCCATC CAAACCATTC GCAACGCGCG CGGCGCAGGT
GTTGTGCTCT GGTCGTTTCA ATCTTCGCCG GACGAGTTGC TCGGCGATCT GTTTGTGAGA
TGA
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| Protein sequence | MIRCLSRPTR PARLSVSRCW LVLSFAVIIA GSCGSANNPP SGALPPVTAD GERLRAGGRD
FEVRGVNYIR PTGDDERRCW TLQFGADANC PWRMPLIESD LDAMRARGVN TVRIFLNYYV
FGGQREADAS YQKSDALRHL EEFIAAANQR SLYVLPVLLV EYPQDQFGAE YYERALEWHV
RPLVRHFAGR PGILAWDLFN EPDIGSPVDV RCWDWDNADF PLCFPLAEER QRFVRTVHDE
VKRLDPERLT TVGMAFAKSY FEPAEASIRM ADVVDFFTFH YYDNEPYDSG RYRQHWYYGE
GFPADLRRAI DELHALGLRK PVVVTELGFP TGLGATRTLD DLRRDQRIAI QTIRNARGAG
VVLWSFQSSP DELLGDLFVR
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