| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0258 |
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| Symbol | |
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| ID | 5537720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 317384 |
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| End bp | 318739 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892422 |
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| Product | heat shock protein DnaJ domain-containing protein |
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| Protein accession | YP_001430409 |
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| Protein GI | 156740280 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.11594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCATG GTGTGCCAGT GTACGATTTC GAGGAGTTCG ACTTCTACGA ATTGCTTGGC
GTGTCGCGTT CGGCATCGCC GGAAGAGATC AAACGTGCAT ATCGGCGCGA GATTGCCAGG
TATCATCCCG ATCGGTTCGT TAATGCCAGC CCGGAAGACC TTGAGTATGC GCGTCGCCGT
AGCCAGTTGC TGACCGAGGC GTATGCGACA TTAAGCAATC CGTCGGCGCG GAACGCTTAC
AACCTTGATC GCCGCCGCCA AGTCGCCCGA AGACCGTCAC GGACCACACC GCCGCCGCCA
ACCCAACGCG ACCATCAGGC GGAACTCTAT CAGCAGGCGC GCGACCATCT CGATGCGGGA
CGGTTTGTTC AGGCAATTGC GGCATTGCGC CAGTTGCACC GGATCAATCC ATTCTACCGC
GATAGCGCTG AGTTGCTCGC GGATGCTGAA CGTCGTCTGC GGGATCGCAC AACGGGAAGA
CGTTCCGGTG TATCACCGGT CAGGCAACGG CGCCTGATTC TGGTTACCGG AGTGGCGGCG
GTTATTGTCC TGATGAGCGG CTCAGTCTGG TGGCTGAGAA CACAGTATGC GCCGCGCTCC
GCCGATGCGG GTGCGGGGGT GGTCGCCACG CCGGCCACTG CGCCATCGCA GACTCCGGTC
GAGCCGACGC CAACCGTGCT ATCGCCAACG GTTCCATCGG TGCGAACGAC GCCTCCCCTG
ACCCAACCGA TCCCGGAAGT GACGGTTGCG CCGCCCACAC AGACAACCCG CGCGCCATTG
CTCCCTCCAA CCCCATCCCC TCTCCCGCCA TCGCTCGAAG CGGAAGGCGC TGTGATCCTG
CGCGACGATA CGTTCACCAC CGGTTGGGCG TCGGTGCGCC GCACAGACTG GAGTGTCGGT
CCACGTGATG AACGGTATCG CATCACTGCT GAGGCGCAGG TGGGGGTGAT CTGGAGTTAT
CGCAGCGTGC CGAACAGCGA TGTACGCATG AAGGTTGATG TCGAAGTCAT CGAGGGTGAA
GGCGGGGTCA TTCTGCGATT TCGCAACGAA CAGAATTACC TGATCTTCAT GGTTGCGCCA
CAAACCGGAA GTTTTCGTCT CGAACATATG CGCAATGGGA CGCTGGCGCT GATGGCTGGC
GGGACGCGCG ACGATCTTCG CTTTCCCGAT GGACGGTTTC GCCTCGATGT CCGTCTCAGC
AGTGAACAGG TCAGGATTGC GGTCAATGGA CAGGTCGTGG TCGAGACTGA TGTGCCCGCT
CTACCGGCGA CATCGCGCTT TGGGCTGGCG GTGGCTGCGC GCGATACACG CAGTGAAGCC
TGGTTCGATA ATCTGGAAAT TCGAGCGTTA CCTTAA
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| Protein sequence | MPHGVPVYDF EEFDFYELLG VSRSASPEEI KRAYRREIAR YHPDRFVNAS PEDLEYARRR
SQLLTEAYAT LSNPSARNAY NLDRRRQVAR RPSRTTPPPP TQRDHQAELY QQARDHLDAG
RFVQAIAALR QLHRINPFYR DSAELLADAE RRLRDRTTGR RSGVSPVRQR RLILVTGVAA
VIVLMSGSVW WLRTQYAPRS ADAGAGVVAT PATAPSQTPV EPTPTVLSPT VPSVRTTPPL
TQPIPEVTVA PPTQTTRAPL LPPTPSPLPP SLEAEGAVIL RDDTFTTGWA SVRRTDWSVG
PRDERYRITA EAQVGVIWSY RSVPNSDVRM KVDVEVIEGE GGVILRFRNE QNYLIFMVAP
QTGSFRLEHM RNGTLALMAG GTRDDLRFPD GRFRLDVRLS SEQVRIAVNG QVVVETDVPA
LPATSRFGLA VAARDTRSEA WFDNLEIRAL P
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