| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0239 |
|---|
| Symbol | |
|---|
| ID | 5537701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 295732 |
|---|
| End bp | 296388 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640892403 |
|---|
| Product | phosphate uptake regulator, PhoU |
|---|
| Protein accession | YP_001430390 |
|---|
| Protein GI | 156740261 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGATC ATTACATCAA ACAGTTACAA GCGGTGCATG ACGATCTGCT CCGCATGGGC
AGCCGCGTCG AACATCAACT TGCCGACGCC ATCAAAGCGC TGGATCGCCT GGACATCGTG
CTGGCACGCG AGGTGGTCGC GCGGGATCGC GAGATCGATG CCGCGCGCAA TGCTATCGAT
GAGCGCGTCT TTGAATTGAT CGCCATGCAG CAACCGGTCG CCACCGATCT GCGCAGCCTG
CTGGCAGCCG TCGCCATTGC GGGTGAACTG GAACGCGCCG CCGATTACGC CAAAGGGATC
GCCAAAAAGG TTGAGCGCAG TTTGCACACG CCGGCGATCA TCGAGGCGCC AATCGAACTC
CATCGTCTGG GCACACTGGT GCAAAATATG CTGCACACCT GCCTGGATGC GTTTGTGCAA
CTCGATGTGG CGCTGGCGCG CTCGCTCGGC GAGCGGGATC ATGAGATCGA CGCGCTGGAG
GACCGGGTCG TCGAGATGCT GAAAGACATT GCGTGCCGGG ATCCAAATAA ACTCGATTGC
GCACTACTCC TGATCGACAC CGCTCATGTG CTCGAACGTC TCGCCGACCG AACAACCAAT
ATCGCCGAAC GGGTCATTTT CATCGCCACC GCAAAGGCGG AGGAAATCAA CCCATGA
|
|---|
| Protein sequence | MRDHYIKQLQ AVHDDLLRMG SRVEHQLADA IKALDRLDIV LAREVVARDR EIDAARNAID
ERVFELIAMQ QPVATDLRSL LAAVAIAGEL ERAADYAKGI AKKVERSLHT PAIIEAPIEL
HRLGTLVQNM LHTCLDAFVQ LDVALARSLG ERDHEIDALE DRVVEMLKDI ACRDPNKLDC
ALLLIDTAHV LERLADRTTN IAERVIFIAT AKAEEINP
|
|---|
| |